DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11085 and dlx4b

DIOPT Version :9

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_571393.1 Gene:dlx4b / 30581 ZFINID:ZDB-GENE-990415-50 Length:254 Species:Danio rerio


Alignment Length:182 Identity:48/182 - (26%)
Similarity:84/182 - (46%) Gaps:42/182 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 GLLAAAASGANGDRDANGGSGPGSGGGTSGGYAEH---------KLQLSKSGRKPRRRRTAFTHA 170
            |.::|||.||......|..|  |:...|......|         :::|:..|:|.|:.||.::..
Zfish    77 GPVSAAAPGAYMPYQPNNHS--GALAHTRAEDTNHEKPAVIENGEIRLNGKGKKIRKPRTIYSSV 139

  Fly   171 QLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWKRQNQLRLEQLRHQATMEKD 235
            ||..|.::|:..:||::.:|:|:|..|.|::||||.|:||:|:|:|:                  
Zfish   140 QLQALHQRFQQTQYLALPERADLAAKLGLTQTQVKIWFQNKRSKYKK------------------ 186

  Fly   236 FVVQDGGGAGGLG----------CCPSGLSSSFSAAAAAAAAASNPCNFLTS 277
              :...|.:|..|          |.| |||..:..:.|......:|.:::.:
Zfish   187 --IMKHGSSGPEGELLHTSSSSPCSP-GLSQLWEVSMANKVPPMHPSSYMNN 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeobox 163..216 CDD:278475 22/52 (42%)
dlx4bNP_571393.1 Homeobox 132..185 CDD:278475 22/52 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.