Protein Alignment CG11085 and msx1a

DIOPT Version :10

• Sequence 1: NP_572815.3
• Gene: CG11085 / 32213
• FlyBaseID: FBgn0030408
• Length: 295
• Species: Drosophila melanogaster
• Sequence 2: NP_571348.1
• Gene: msx1a / 30527
• ZFINID: ZDB-GENE-980526-312
• Length: 233
• Species: Danio rerio
• Alignment Length: 142
• Identity: 53/142 - (37%)
• Similarity: 80/142 - (56%)
• Gaps: 22/142 - (15%)

  Fly   151 LQLSKSGRKPRRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKW 215
            |:..|:.|||   ||.|:.|||..||||||.::|||:|:|::.:.:|:|:|||||.|:||||.|.
Zfish   105 LRKHKTNRKP---RTPFSTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKA 166

  Fly   216 KRQNQLRLEQLRHQATMEKDFVVQDGGGAGGLGCCPSGLSSSFSAAA--AAAAAASNPCN-FLTS 277
            ||..:..||:|:..|   |..:             |.....||.|.|  .|.:|.|:|.: ...:
Zfish   167 KRLQEAELEKLKMAA---KPLL-------------PPAFGISFPAGAHIPAYSAGSHPFHRHSAN 215

  Fly   278 AAAAAIFRNVGY 289
            .:...::.::||
Zfish   216 VSPVGLYTHMGY 227

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11085	NP_572815.3	Homeodomain	161..217	CDD:459649	30/55 (55%)
msx1a	NP_571348.1	Homeodomain	112..168	CDD:459649	33/58 (57%)