DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11085 and msx3

DIOPT Version :9

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_571347.2 Gene:msx3 / 30526 ZFINID:ZDB-GENE-980526-306 Length:273 Species:Danio rerio


Alignment Length:247 Identity:77/247 - (31%)
Similarity:108/247 - (43%) Gaps:55/247 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQSSKSFLIRDLLGDLINRRQTDSELELSNDDSDIDIEDRSTPDSTAAGCQQELLLSHHHRRFTH 65
            |.:|:..|.::  |.|..|:..|.|...|||.:.:            .||:.:.|..        
Zfish     7 MMNSEGPLSQE--GKLQERKSADKEDAQSNDKAAV------------KGCKGKALSL-------- 49

  Fly    66 HDESSVESCLS-ATRGPGSGTGSGGGGGGGGGGGVASGLSAAAAAAGVAAGLLAA-----AASGA 124
              ..||||.:| .|......|.|        ..|:.|..|.|.....::...|.|     ..|.:
Zfish    50 --PFSVESLISDRTSSRTLYTSS--------EAGIISPTSGADERLKLSPMALYADRKIPVESVS 104

  Fly   125 NGDRDANGGSGPGSGGGTSGGY--------AEHK------LQLSKSGRKPRRRRTAFTHAQLAYL 175
            |......|.....|..|.||.:        ..|.      |:..|:.|||   ||.||.:||..|
Zfish   105 NLSDCKRGDMEELSDKGQSGWFQTTSYTSPPRHSSPPPCTLRKHKNNRKP---RTPFTTSQLLAL 166

  Fly   176 ERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWKRQNQLRLEQLR 227
            |||||.::|||:|:|::.:.:|||:|||||.|:||||.|.||..:..||:|:
Zfish   167 ERKFRQKQYLSIAERAEFSNSLNLTETQVKIWFQNRRAKAKRLQEAELEKLK 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeobox 163..216 CDD:278475 31/52 (60%)
msx3NP_571347.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..159 12/47 (26%)
Homeobox 154..207 CDD:278475 32/55 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000776
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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