DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11085 and rx3

DIOPT Version :10

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_571302.1 Gene:rx3 / 30474 ZFINID:ZDB-GENE-990415-238 Length:292 Species:Danio rerio


Alignment Length:281 Identity:76/281 - (27%)
Similarity:112/281 - (39%) Gaps:61/281 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 DIEDRSTPDS---TAAGCQQELLLSHHHRRFTHHDESSVESCLSATRG-----PGSGTGSGGGGG 92
            |:|||.:|.:   .:.|.|..:              .|:||.| ..:|     |....|||..|.
Zfish    10 DMEDRLSPSARLVRSPGSQTRI--------------HSIESIL-GFKGETLFHPAFPYGSGKTGK 59

  Fly    93 GGGGGGVASGLSAAAAAAGVAAGLLAAAASGANGDRDANGGSGPGSGGGTSGGYAEHKLQLSKSG 157
            .      ...||....:.....|:..:....:....||:||                ||...::.
Zfish    60 D------TEHLSPKKDSNKHFDGVCRSTVMVSPDLPDADGG----------------KLSDDENP 102

  Fly   158 RKP-RRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWKRQNQL 221
            :|. ||.||.||..||..|||.|....|..|..|.::|..:||.|.:|:.|:||||.||:||.:|
Zfish   103 KKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNRRAKWRRQEKL 167

  Fly   222 RLEQLRHQ----ATMEKDFVVQDGGG-------AGGLGCCPSGLSS--SFSAAAAAAAAASNPCN 273
            .:..::.|    .::.:...:..|.|       .|.:....|.|.|  ||.....|..|:..|..
Zfish   168 EVSSIKLQESSMLSIPRSGPLSLGSGLPLEPWLTGPISTSSSPLQSLPSFITPQQAVPASYTPPQ 232

  Fly   274 FLTSAAAAAIFRNVGYVHGCP 294
            ||:|:.......::|.|  ||
Zfish   233 FLSSSTLNHSLPHIGAV--CP 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeodomain 161..217 CDD:459649 27/55 (49%)
rx3NP_571302.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27 5/16 (31%)
Octapeptide motif 32..39 4/7 (57%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 53..72 6/24 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 85..107 7/37 (19%)
Homeodomain 107..163 CDD:459649 27/55 (49%)
OAR 268..284 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 272..285
Nuclear localization signal. /evidence=ECO:0000255 278..282
Blue background indicates that the domain is not in the aligned region.

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