Protein Alignment CG11085 and Hoxb1

DIOPT Version :9

• Sequence 1: NP_572815.3
• Gene: CG11085 / 32213
• FlyBaseID: FBgn0030408
• Length: 295
• Species: Drosophila melanogaster
• Sequence 2: XP_220896.4
• Gene: Hoxb1 / 303491
• RGDID: 1310298
• Length: 297
• Species: Rattus norvegicus
• Alignment Length: 241
• Identity: 68/241 - (28%)
• Similarity: 91/241 - (37%)
• Gaps: 87/241 - (36%)

  Fly    80 GP------GSGTGSGGGGGGGGGGGVASGLSAAAAAAGVAAG---------------LLAAAASG 123
            ||      |...|.||.......|....||..:..|.||.:|               ..|:|...
  Rat    91 GPSQYYSMGQSEGDGGYFHPSSYGAQLGGLPDSYGAGGVGSGPYPPPQPPYGTEQTSNFASAYDL 155

  Fly   124 ANGDRDANGGSGPGS------------------------GGGTSGGYAEHKLQLSKSGRKPRRRR 164
            .:.|::::..|.|.|                        |.||.||.                 |
  Rat   156 LSEDKESSCSSEPSSLTARTFDWMKVKRNPPKTAKVSELGLGTPGGL-----------------R 203

  Fly   165 TAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWKRQNQLRLEQLRHQ 229
            |.||..||..||::|...||||.|.|.::|.||.|:|||||.|:||||.|.|::.
  Rat   204 TNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKRE---------- 258

  Fly   230 ATMEKDFVVQDGG--GAGGLGCCP---SGLSSSFSAAAAAAAAASN 270
                     ::||  .||..| ||   :|.:|..||..:..|:.|:
  Rat   259 ---------REGGRVPAGPPG-CPKEAAGEASDQSACTSPEASPSS 294

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11085	NP_572815.3	Homeobox	163..216	CDD:278475	30/52 (58%)
Hoxb1	XP_220896.4	Homeobox	203..255	CDD:278475	30/51 (59%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910