DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11085 and Tlx1

DIOPT Version :9

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:XP_006526978.1 Gene:Tlx1 / 21908 MGIID:98769 Length:345 Species:Mus musculus


Alignment Length:233 Identity:67/233 - (28%)
Similarity:88/233 - (37%) Gaps:86/233 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 SATRGPGSGTGSGGGGGGGGGGGVASGLSAAAAAAGVAAGLLAAAASGANGDRDANGGSGPGSGG 140
            ||......|||:.|.||.||.||.|.| ...|.:.|...|       ..|.:....||.|||.||
Mouse    62 SAAGAGAGGTGAYGAGGPGGPGGPAGG-GGGACSMGPLPG-------SYNVNMALAGGPGPGGGG 118

  Fly   141 GTSG----------------------GYAEHKLQLS--------------------------KSG 157
            |..|                      |...|...|:                          :|.
Mouse   119 GGGGAGGAGALSAAGVIRVPAHRPLAGAVAHPQPLATGLPTVPSVPAVPGVNNLTGLTFPWMESN 183

  Fly   158 R------------------------------KPRRRRTAFTHAQLAYLERKFRCQKYLSVADRSD 192
            |                              |.::.||:||..|:..||::|..||||:.|:|:.
Mouse   184 RRYTKDRFTVALSPFTVTRRIGHPYQNRTPPKKKKPRTSFTRLQICELEKRFHRQKYLASAERAA 248

  Fly   193 VAETLNLSETQVKTWYQNRRTKWKRQNQLRLEQLRHQA 230
            :|:.|.:::.|||||:|||||||:||.....|..|.||
Mouse   249 LAKALKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQA 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeobox 163..216 CDD:278475 27/52 (52%)
Tlx1XP_006526978.1 Homeobox 219..273 CDD:365835 28/53 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.