DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11085 and Rhox4e

DIOPT Version :9

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_957688.2 Gene:Rhox4e / 194856 MGIID:3613390 Length:205 Species:Mus musculus


Alignment Length:157 Identity:44/157 - (28%)
Similarity:65/157 - (41%) Gaps:26/157 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 GGGGGGGGVASGLSAAAAAAGVAAGLLAAAASGANGDRDANGGSGPGSGGGTSGGYAEHKLQ--- 152
            |.|...|....|.|.|||.....|..|:.....|.||.|....|.......:.....|.||.   
Mouse    34 GEGRNEGESVLGQSGAAAVEWDKAEELSGEGGPAAGDADLMDNSNQEDQDTSGSAQEEEKLPEEP 98

  Fly   153 -------LSK--------SGRKPR----RRRTA---FTHAQLAYLERKFRCQKYLSVADRSDVAE 195
                   :.|        ||.:|:    ::|:.   |...||..|||.|:...::...:|..:|.
Mouse    99 VLRDAVVIDKVQPIPVLVSGVRPKSVWVQQRSLHYNFQWWQLQELERIFQQNHFIRAEERRHLAR 163

  Fly   196 TLNLSETQVKTWYQNRRTKWKR-QNQL 221
            .:.:|||:||.|::.||..::| |:||
Mouse   164 WIGVSETRVKRWFKKRREHFRRGQSQL 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeobox 163..216 CDD:278475 18/55 (33%)
Rhox4eNP_957688.2 P-loop_NTPase 41..>126 CDD:304359 19/84 (23%)
homeodomain 129..187 CDD:238039 19/57 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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