DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11085 and pha-2

DIOPT Version :9

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_508131.4 Gene:pha-2 / 187454 WormBaseID:WBGene00004011 Length:214 Species:Caenorhabditis elegans


Alignment Length:161 Identity:52/161 - (32%)
Similarity:74/161 - (45%) Gaps:43/161 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 NGGSGPGSG----------GGTSGGYAEHKLQ-----LSKSGRKPRRRRTAFTHAQLAYLERKFR 180
            ||.:.||:.          ..|.|...:.:|.     :|||.:|.:..:..||:.|...||.||.
 Worm    80 NGKNRPGAPNQVPLLNMNVNQTMGNMWDPRLSWLYPYMSKSPQKRKGGQIRFTNEQTDALEHKFD 144

  Fly   181 CQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWKRQNQLRLEQLRHQATMEKDFVVQDGGGAG 245
            ..||||..:|..:|::|:|||.|||||:||||.||:|              :.||...:|.    
 Worm   145 SHKYLSPQERKKLAKSLSLSERQVKTWFQNRRAKWRR--------------VRKDGEDEDE---- 191

  Fly   246 GLGCCPSGLSSSFSAAAAAAAAASNPCNFLT 276
                .|:|.    ||.:.....:|||  ||:
 Worm   192 ----MPNGA----SARSLGQLQSSNP--FLS 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeobox 163..216 CDD:278475 27/52 (52%)
pha-2NP_508131.4 Homeobox 130..181 CDD:365835 28/50 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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