DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11085 and tab-1

DIOPT Version :10

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_495392.1 Gene:tab-1 / 185156 WormBaseID:WBGene00006380 Length:197 Species:Caenorhabditis elegans


Alignment Length:226 Identity:67/226 - (29%)
Similarity:95/226 - (42%) Gaps:69/226 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SFLIRDLLGDLINRRQTDSELELSNDDSDIDIEDRSTPDSTAAGCQQELLLSHHHRRFTHHDESS 70
            ||.|.|||....|..|...:|:          :...||.|::                   ||.|
 Worm     7 SFSIDDLLRGHSNEIQRILKLD----------QTSPTPQSSS-------------------DEGS 42

  Fly    71 VESCLSATRGPGSG------TGSGGGGGGGGGGGVASGLSAAAAAAGVAAGLLAAAASG------ 123
            .:|.:|....|.:.      |.:           ::..|..||||..:...||.|..:|      
 Worm    43 EKSSISVMSVPLTNELTPTITPA-----------LSDQLWLAAAAFPIEHSLLLAQRNGVFPGFW 96

  Fly   124 --ANGDRDANGGSGPGSGGGTSGGYAEHKLQLSKSGRKPRRRRTAFTHAQLAYLERKFRCQKYLS 186
              |:..|.:|          .:..|...:|:.|:     |:.||.|:..||..|||:|..|:|||
 Worm    97 STADQIRLSN----------ATKAYRRLRLECSR-----RKARTVFSDQQLQGLERRFESQRYLS 146

  Fly   187 VADRSDVAETLNLSETQVKTWYQNRRTKWKR 217
            ..:|.::|..|||||||||||:||||.|.|:
 Worm   147 TPERIELANALNLSETQVKTWFQNRRMKHKK 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeodomain 161..217 CDD:459649 32/55 (58%)
tab-1NP_495392.1 Homeodomain 121..177 CDD:459649 32/55 (58%)

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