DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11085 and cog-1

DIOPT Version :9

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_001022264.1 Gene:cog-1 / 175149 WormBaseID:WBGene00000584 Length:256 Species:Caenorhabditis elegans


Alignment Length:268 Identity:73/268 - (27%)
Similarity:118/268 - (44%) Gaps:49/268 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SKSFLIRDLLGDLINRRQTDSELELSNDDS-DIDIEDRSTPDSTAAGCQQELLLSHHHRRFTHHD 67
            |.::.|.:|   |:.::::......|.||| ..:.:|:.:|.:|::              |....
 Worm    25 SSTYSISNL---LLEKKESSPSGSSSEDDSASSNDDDQRSPSATSS--------------FIFPP 72

  Fly    68 ESSVESCLSATRGPGSGTGSGGGGGGGGGGG-------VASGLSAAAAAAGVAAGLLAAAASGAN 125
            .||..|..||| .|..........||....|       :.|.|::.:....|....::.|.:..|
 Worm    73 ASSSSSSESAT-SPTQIMAQLMANGGAVDPGLQAYFFLLQSQLNSQSMMNRVTQENVSRALTSFN 136

  Fly   126 GDRDANGGSGPGSGGGTSG-GYAEHKLQLSKS--GRKPRRRRTAFTHAQLAYLERKFRCQKYLSV 187
            ...:.     ||:....|. |..:|.:|||.:  ..:.::.|..||..|:..|||||...|||:.
 Worm   137 LLNNL-----PGALPSLSPMGRLQHSMQLSPNSLNMQKKQSRPTFTGHQIYQLERKFEQTKYLAG 196

  Fly   188 ADRSDVAETLNLSETQVKTWYQNRRTKWKRQNQLRLEQLRHQATMEKDFVVQDGGGAGGLGCCPS 252
            |||:.:|:.||:||:|||.|:|||||||:::.......::..|:.:|.               |.
 Worm   197 ADRAQLAQELNMSESQVKVWFQNRRTKWRKKEAADNALVKRGASGDKS---------------PC 246

  Fly   253 GLSSSFSA 260
            .||...||
 Worm   247 SLSPFLSA 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeobox 163..216 CDD:278475 30/52 (58%)
cog-1NP_001022264.1 Homeobox 172..226 CDD:365835 31/53 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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