Protein Alignment CG11085 and Hoxc4

DIOPT Version :9

• Sequence 1: NP_572815.3
• Gene: CG11085 / 32213
• FlyBaseID: FBgn0030408
• Length: 295
• Species: Drosophila melanogaster
• Sequence 2: NP_038581.2
• Gene: Hoxc4 / 15423
• MGIID: 96195
• Length: 264
• Species: Mus musculus
• Alignment Length: 249
• Identity: 63/249 - (25%)
• Similarity: 97/249 - (38%)
• Gaps: 60/249 - (24%)

  Fly    49 GCQQELLLSHHHRRF-------THHDESSVESCLSATRGPGSGTGSGGGGGGGGGGGVASGLSAA 106
            |..:|....|||:..       ..:.|... ||.| .:|||:....|....|......:..|...
Mouse    38 GRTRESGFQHHHQELYPPPPPRPSYPERQY-SCTS-LQGPGNSRAHGPAQAGHHHPEKSQPLCEP 100

  Fly   107 AAAAGVAAGLLAA--AASGANGDRDANGGS-----------------GPGSGGGTSGGYAEHKLQ 152
            |..:|.:|....|  |.|....|..::..|                 .|...||
Mouse   101 APLSGTSASPSPAPPACSQPAPDHPSSAASKQPIVYPWMKKIHVSTVNPNYNGG----------- 154

  Fly   153 LSKSGRKPRRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWKR 217
                  :|:|.|||:|..|:..||::|...:||:...|.::|.:|.|||.|:|.|:||||.|||:
Mouse   155 ------EPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213

  Fly   218 QNQLRLEQLRHQATMEKDFVVQDGGGAGGLGCCPSGLSSSFSAAAAAAAAASNP 271
            .::|...::|               .|...|..||.||::....:...:.::.|
Mouse   214 DHRLPNTKVR---------------SAPPAGAAPSTLSAATPGTSEDHSQSATP 252

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11085	NP_572815.3	Homeobox	163..216	CDD:278475	24/52 (46%)
Hoxc4	NP_038581.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	19..130		22/93 (24%)
		Antp-type hexapeptide	135..140		0/4 (0%)
		Homeobox	159..213	CDD:365835	25/53 (47%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	214..264		9/54 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910