DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11085 and AgaP_AGAP006540

DIOPT Version :9

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:XP_316578.4 Gene:AgaP_AGAP006540 / 1277139 VectorBaseID:AGAP006540 Length:334 Species:Anopheles gambiae


Alignment Length:144 Identity:38/144 - (26%)
Similarity:54/144 - (37%) Gaps:32/144 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 GGTSGGYAEHKLQLSKSGRKPRRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQV 204
            |..:.||        :...|.:|.||.||..||..|:..|.........|...:|....||:...
Mosquito   151 GCEADGY--------QKNNKTKRVRTTFTEEQLQILQANFNIDSNPDGQDLERIASVTGLSKRVT 207

  Fly   205 KTWYQNRRTKWKRQNQ-------LRLEQ---LRHQATMEKDFVVQDGGGA----------GGLGC 249
            :.|:||.|.:.|:..|       |..|.   .|| ..::..:..|..|||          ||:|.
Mosquito   208 QVWFQNSRARQKKHVQGTGVYPYLEGEMNPFARH-INLQLSYTFQQAGGAVHNSLHLGPGGGMGV 271

  Fly   250 ---CPSGLSSSFSA 260
               .|.|.:.||.:
Mosquito   272 LSGSPFGPNGSFGS 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeobox 163..216 CDD:278475 16/52 (31%)
AgaP_AGAP006540XP_316578.4 LIM1_AWH 23..76 CDD:188759
LIM2_AWH 84..138 CDD:188765
Homeobox 167..219 CDD:278475 16/51 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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