DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11085 and hmx3b

DIOPT Version :9

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:XP_017214099.1 Gene:hmx3b / 108191768 ZFINID:ZDB-GENE-130603-102 Length:196 Species:Danio rerio


Alignment Length:143 Identity:51/143 - (35%)
Similarity:72/143 - (50%) Gaps:16/143 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 GGVASGLSAAAAAAGVAAGLLAA---------AASGANGDRDANGGSGPGSGGGTSGGYAEHKLQ 152
            |.:..|....|.|....||:..|         ||.|.:.:.|.:....|.......    |.:.|
Zfish    33 GFLRLGPWCCAGAPETPAGMRRAPADTLQPDCAAPGPSAEDDDDDEEAPLEDSDCE----EARAQ 93

  Fly   153 LSKSGRKPRRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWKR 217
            :.|..|| ::.||.|:.||:..||..|..::|||.::|:.:|.:|:|:|||||.|:||||.||||
Zfish    94 VKKLCRK-KKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKR 157

  Fly   218 QNQLRLE--QLRH 228
            |....||  .|.|
Zfish   158 QIAAELESASLSH 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeobox 163..216 CDD:278475 26/52 (50%)
hmx3bXP_017214099.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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