DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG11085 and nkx3-3

DIOPT Version :9

Sequence 1:	NP_572815.3	Gene:	CG11085 / 32213	FlyBaseID:	FBgn0030408	Length:	295	Species:	Drosophila melanogaster
Sequence 2:	XP_002937227.1	Gene:	nkx3-3 / 100485176	XenbaseID:	XB-GENE-479908	Length:	241	Species:	Xenopus tropicalis

Alignment Length:	174	Identity:	55/174 - (31%)
Similarity:	77/174 - (44%)	Gaps:	36/174 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly    70 SVESCLSATRGPGSGTGSGGGGGGGGGGGVASGLSAAAAAAGVAAGLLAAAASGANGDRDANGGS 134
            |::..|:.|....:| |:.|.||.|...|.|......::.        ...:..|.|..|.....
Frog    13 SIQDILARTCRDSNG-GNEGNGGNGDNTGKAKRTDEKSST--------PPHSPSAEGHNDWPQAD 68

  Fly   135 GP-----------GSG---------GGTSGGYAEHKL-----QLSKSGRKPRRRRTAFTHAQLAY 174
            .|           .||         ..::|.|.:...     ...||.:|  |.|.||:|||:..
Frog    69 NPPLTPEKEKTDTDSGTEDSTWEPEAASTGAYTDPSSGDLLGDSPKSSKK--RSRAAFSHAQVYE 131

  Fly   175 LERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWKRQ 218
            |||:|..|:|||..:|:|:|..|.|:|||||.|:||||.|.||:
Frog   132 LERRFSLQRYLSGPERADLAAALKLTETQVKIWFQNRRYKTKRK 175

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG11085	NP_572815.3	Homeobox	163..216	CDD:278475	30/52 (58%)
nkx3-3	XP_002937227.1	Homeobox	120..174	CDD:365835	30/53 (57%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910