DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11085 and hoxd8

DIOPT Version :9

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_001135589.1 Gene:hoxd8 / 100216142 XenbaseID:XB-GENE-920113 Length:231 Species:Xenopus tropicalis


Alignment Length:95 Identity:34/95 - (35%)
Similarity:47/95 - (49%) Gaps:15/95 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 SGGGTSGGYAEHKLQLSKS-------------GRKPRRRRTAFTHAQLAYLERKFRCQKYLSVAD 189
            |...:.|...||..|.|.:             ||  ||.|..::..|...||::|....||:...
 Frog   106 SPSASIGADPEHLHQNSPASHMFPWMRAQVAPGR--RRGRQTYSRFQTLELEKEFLFNPYLTRKR 168

  Fly   190 RSDVAETLNLSETQVKTWYQNRRTKWKRQN 219
            |.:|:..|.|:|.|||.|:||||.|||::|
 Frog   169 RIEVSHALGLTERQVKIWFQNRRMKWKKEN 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeobox 163..216 CDD:278475 21/52 (40%)
hoxd8NP_001135589.1 Homeobox 143..196 CDD:365835 22/52 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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