DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11085 and barx2

DIOPT Version :10

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:XP_001342044.1 Gene:barx2 / 100002200 ZFINID:ZDB-GENE-081120-4 Length:268 Species:Danio rerio


Alignment Length:156 Identity:55/156 - (35%)
Similarity:72/156 - (46%) Gaps:42/156 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 RKPRRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWK------ 216
            :||||.||.||..||..||:||:.|||||..||.|:|::|.|::.||||||||||.|||      
Zfish   117 KKPRRSRTIFTELQLLGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLKG 181

  Fly   217 ------------RQNQL-RLEQLRHQATMEKDFVVQDGGGAGGLGCCPSGLSSSFSAAAAAAAAA 268
                        ::|.: ..|::..|..||.....::                ...|........
Zfish   182 GHEAPTKPKGRPKKNSIPTTEEIEAQERMEAKLAEEE----------------RLHAEVEDEVFQ 230

  Fly   269 SNPCNFLTSAAAAAIFRNVGYVHGCP 294
            |.|.:..|||.:|     |.||  ||
Zfish   231 SQPQDLSTSATSA-----VEYV--CP 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeodomain 161..217 CDD:459649 36/73 (49%)
barx2XP_001342044.1 Homeodomain 120..176 CDD:459649 35/55 (64%)

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