DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fpgs and RMA1

DIOPT Version :9

Sequence 1:NP_572814.1 Gene:Fpgs / 32212 FlyBaseID:FBgn0030407 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_012790.1 Gene:RMA1 / 853727 SGDID:S000001615 Length:430 Species:Saccharomyces cerevisiae


Alignment Length:431 Identity:98/431 - (22%)
Similarity:164/431 - (38%) Gaps:103/431 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 KYLERSGLPLETVEQLSFIHVAGTKGKGSTCALTESLLRHQGFR-----TGFFSSPHILFTNER- 188
            :.||..|.|.::   ||.:|:|||.||.:......|:|:|.|.:     .|.:::..:|...|. 
Yeast    15 RLLEHVGNPQDS---LSILHIAGTNGKETVSKFLTSILQHPGQQRQRVLIGRYTTSSLLNAKEED 76

  Fly   189 IRIDGQLLSKDKFTEQFWKVYNRL-WDLREHDHDMPAY---FKFLTILGFHVFVAENVDVVVLEV 249
            |.|:.:.:|..:        |:|: .:|.|.|..:...   .:.||.:....|..:|....::|.
Yeast    77 ISINNEAISLIE--------YSRIEKELIEADSSLKLQCNNLELLTSVALVYFAKKNCQWCIIET 133

  Fly   250 GIGGEHDCTNIVRNVRTV--GITSLGLEHTELLGRTLPEI---AWQKAGIIKTGSH-VFTHVTQP 308
            |:.|:.|..:|:.....|  .||::|:.....|.:.|.:|   :..||..:..||: .|...|  
Yeast   134 GLAGKQDPGSIIAGQSRVCCAITNVGISDEAFLCKFLSQITESSTNKAIFLLDGSNDEFVRNT-- 196

  Fly   309 ECLEVIRQRTKEHSATLYEV--PPTEDYFRSKAYAPIWQTFSNLIRLNGS--------LAIQLA- 362
                 |.:|..:....| |:  |...||   ..:...|.|..  :||..|        |.:.:| 
Yeast   197 -----ITKRCHDVGCPL-EITDPSLRDY---NVHTDTWGTLE--VRLPYSEEEYQIFNLRVAIAV 250

  Fly   363 QDWLSQSGKQQHTPNEVKMDPQLLDGLISTHWPGRCQLIEW-------HGMRLHLDGAHTLESME 420
            .|:||:..|..     :..| ||..||||..||.....:::       ..:.|.||.|:..::..
Yeast   251 LDFLSKEKKVC-----ISKD-QLSQGLISVDWPRSLHRLDYCYESTSGKKIALLLDNANNAKAAR 309

  Fly   421 VCTDWFEKNVRDSVNPKILIFNRTGESGFAPLLKLLNRTCDF---------------------DM 464
            ...........|:  |...:...|.....:|||..|.|..|:                     ::
Yeast   310 NLACHLRTTYGDT--PLTFVIAITTGKKVSPLLDPLIRPQDYVIVTRFGSVVGMPWIQSLEPVNL 372

  Fly   465 VCFVPNLATSTPNAPSQVMVRFSPEMQLNRARIIASAWSDL 505
            :.|:.|..|..        |...|::|        |.|:.|
Yeast   373 LAFIKNRYTRN--------VNMQPDLQ--------SVWTFL 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FpgsNP_572814.1 PLN02881 90..554 CDD:215476 98/431 (23%)
RMA1NP_012790.1 FolC 10..430 CDD:223362 98/431 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346398
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0285
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001698
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100496
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.640

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