DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fpgs and GLA1

DIOPT Version :9

Sequence 1:NP_572814.1 Gene:Fpgs / 32212 FlyBaseID:FBgn0030407 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_198963.2 Gene:GLA1 / 834149 AraportID:AT5G41480 Length:530 Species:Arabidopsis thaliana


Alignment Length:561 Identity:139/561 - (24%)
Similarity:220/561 - (39%) Gaps:174/561 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 NSMSNSRVDTKADT--------------IKYLERSGLP------------LETVEQL-------- 145
            |.:||..:.|.:.|              :|..|:||:|            |..:::|        
plant    27 NLISNRNLSTISSTEDPELRDFVGFLESLKNYEKSGVPKGAGTDSDDGFDLGRMKRLMLRLRNPH 91

  Fly   146 ---SFIHVAGTKGKGSTCALTESLLRHQGFRTGFFSSPHILFTNERIRIDGQLLSKDKFTEQFWK 207
               ..:|||||||||||.|...::||..|:..|.:||||||...|||..:|:.:|.....:.|:.
plant    92 YKYKVVHVAGTKGKGSTSAFLSNILRAGGYSVGCYSSPHILSIKERISCNGEPVSASTLNDLFYS 156

  Fly   208 VYNRLWDLREHDHDMPAYFKFLTILGFHVFVAENVDVVVLEVGIGGEHDCTNIVR--NVRTVGIT 270
            |...|....:.::...::|:.||.:.|.:|..||||:.|:|.|:||..|.||::.  |:....||
plant   157 VKPILEQSIQEENGSLSHFEILTGIAFSLFEKENVDIAVIEAGLGGARDATNVIESSNLAASVIT 221

  Fly   271 SLGLEHTELLGRTLPEIAWQKAGIIKTGSHV-----FTHVTQPECLEVIRQRTKEHSATLYEVPP 330
            ::|.||...||.:|..||..|:||||.|..|     |                         :|.
plant   222 TIGEEHMAALGGSLESIAEAKSGIIKHGRPVVLGGPF-------------------------LPH 261

  Fly   331 TEDYFRSKAYAPI------------WQTFSNLIRLNGSLAIQLAQ--DWLSQSGKQQHTPNEVK- 380
            .|...|||| |.:            ..:...:|..||   |.|.|  |.:.|:.|......|:. 
plant   262 IEGILRSKA-ASVSSSVILASNIGSSSSIKGIINKNG---IGLCQSCDIVIQNEKDDQPIVELSD 322

  Fly   381 --------------------------------MDPQLLDGLISTHWPGRCQLIE--------WHG 405
                                            .|..:..||.:|...||.|.:.        ..|
plant   323 VNLRMLGHHQLQNAVTATCVSLCLRDQGCGRVTDEAIRIGLENTRLLGRSQFLTPKEAETLLLPG 387

  Fly   406 MRLHLDGAHTLESMEVCTDWFEKNVRDSVNPKILIFNRTGESGFAPLLKLLNRTCDFDMVCFVPN 470
            ..:.||||||.||.....:..:|:..:    |.|:|             ::....|.|.|.|...
plant   388 ATVLLDGAHTKESARALKEMIKKDFPE----KRLVF-------------VVAMASDKDHVSFAKE 435

  Fly   471 LATSTPNAPSQVMVRFSP----EMQLNRARIIASAW---------SDLCATEQKKDVGQV---YN 519
            |.:..  .|..|::..:.    :::...:.::..:|         ..:.|:|.|..:|.:   |.
plant   436 LLSGL--KPEAVILTEADIGGGKIRSTESSVLKESWIKAADELGSRSMEASENKTVLGSLKLAYK 498

  Fly   520 TLTDAFTAIRQRFPQATDNEGQLEVLVTGSIHLLGAAISAL 560
            .|:|..|         :.:.|.  |:||||:|::.:.:::|
plant   499 ILSDDTT---------SSDSGM--VIVTGSLHIVSSVLASL 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FpgsNP_572814.1 PLN02881 90..554 CDD:215476 138/553 (25%)
GLA1NP_198963.2 PLN02913 20..530 CDD:178501 139/561 (25%)
Mur_ligase_M <183..>248 CDD:285457 29/64 (45%)
Mur_ligase_C 389..451 CDD:280948 19/80 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0285
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D840266at2759
OrthoFinder 1 1.000 - - FOG0001698
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100496
Panther 1 1.100 - - O PTHR11136
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.780

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