DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fpgs and DFC

DIOPT Version :9

Sequence 1:NP_572814.1 Gene:Fpgs / 32212 FlyBaseID:FBgn0030407 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_187627.3 Gene:DFC / 820179 AraportID:AT3G10160 Length:625 Species:Arabidopsis thaliana


Alignment Length:644 Identity:188/644 - (29%)
Similarity:280/644 - (43%) Gaps:151/644 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 CSRMSTYSTVTNLSTVKMQRIQHLAAFRSGVSLAERVLNPPQQSINGNHVSGNIQCSSDNNNKDT 92
            |.:..::.|       |.:|..|.....:||.:               :.:.|::.||::.....
plant    20 CDKRKSFFT-------KTKRGFHSLPLGTGVRV---------------YFNNNLRYSSNSIEVVE 62

  Fly    93 NAAFELAIKQLN----SLQSNDAAI---------RNSMSNSRVDTKAD------TIKYLERSGLP 138
            .||..:..|:..    :|.|.|.|:         ||  ...|..||.:      .:.||:...|.
plant    63 KAAINMGSKEDKADNPALSSYDDAMEALSTLISRRN--RGDRTPTKGNRDKLEQVVTYLKILDLE 125

  Fly   139 LETVEQLSFIHVAGTKGKGSTCALTESLLRHQGFRTGFFSSPHILFTNERIRIDGQLLSKDKFTE 203
             :.:::|..|||||||||||||..:|::||:.|||||.|:|||::...||.||||..:|::||.:
plant   126 -DKIKELKVIHVAGTKGKGSTCVFSEAILRNCGFRTGMFTSPHLIDVRERFRIDGLDISEEKFLQ 189

  Fly   204 QFWKVYNRLWDLREHDHDMPAYFKFLTILGFHVFVAENVDVVVLEVGIGGEHDCTNIVRNVRTVG 268
            .||:.:..|.:.......||..|:|||:|.|.:||.|.|||.|:|||:||:.|.||:::.....|
plant   190 YFWECWKLLKEKAVDGLTMPPLFQFLTVLAFKIFVCEKVDVAVIEVGLGGKLDSTNVIQKPVVCG 254

  Fly   269 ITSLGLEHTELLGRTLPEIAWQKAGIIKTGSHVFTHVTQPECLEVIRQRTKEHSATLYEVPPTED 333
            |.|||::|.::||.||.:||:.||||.|.....||.....|.::|:::........|..|.|.| 
plant   255 IASLGMDHMDILGNTLADIAFHKAGIFKPQIPAFTVPQLSEAMDVLQKTANNLEVPLEVVAPLE- 318

  Fly   334 YFRSKAYAPIWQTFSNLIRL-NGSLAIQLAQDWLSQSGK-QQHTPNEVK---MDPQLLDGLISTH 393
               .|....:....|...:| |..||:.|::.||.::|. ::..|||.|   :......||.:..
plant   319 ---PKKLDGVTLGLSGDHQLVNAGLAVSLSRCWLQRTGNWKKIFPNESKETEIPVAFCRGLATAR 380

  Fly   394 WPGRCQLIEWH------------------GMRLHLDGAHTLESMEVCTDWFEKNVR--------- 431
            ..||.|::  |                  .:..:|||||:.||||.|..||...||         
plant   381 LHGRAQVV--HDVVSDPQDSSDSMETPCGDLIFYLDGAHSPESMEACGRWFSSAVRGDKSLSTAV 443

  Fly   432 -------------DSVNPKILIFNRTGESGFAPLLKLLNRTC-----DFDMVCFVPNLAT----- 473
                         :.|:.:||:||.........||..|..||     .|....|||:::|     
plant   444 NGYMRHGEYGTDLNRVSKQILLFNCMEVRDPQVLLPKLVTTCASSGTHFSRALFVPSMSTYNKVI 508

  Fly   474 STPNA-PSQVMVR-FSPEMQLNRARIIASAWSDLCATEQKKDVGQVYNTLTDAFTAIRQR----- 531
            |..:| ||....: .:.:.:|.|      .|.   .:.|..|.|..:....|..||:...     
plant   509 SGASAIPSDTRRKDLTWQFRLQR------LWE---KSIQGTDAGLDHTLKPDGITALPPHDFLCG 564

  Fly   532 -FPQATDNEG-----------------------------QLEVLVTGSIHLLGAAISAL 560
             .||.....|                             :||||||||:||:|..:..|
plant   565 DAPQCGGPAGTPVTSSAVMPSLPLTINWLRDCVRRNPSLKLEVLVTGSLHLVGDVLRLL 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FpgsNP_572814.1 PLN02881 90..554 CDD:215476 176/574 (31%)
DFCNP_187627.3 PLN02881 68..625 CDD:215476 176/574 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0285
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 243 1.000 Inparanoid score I1065
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D840266at2759
OrthoFinder 1 1.000 - - FOG0001698
OrthoInspector 1 1.000 - - mtm1059
orthoMCL 1 0.900 - - OOG6_100496
Panther 1 1.100 - - O PTHR11136
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2113
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.830

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