DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXC4 and Antp

DIOPT Version :9

Sequence 1:NP_055435.2 Gene:HOXC4 / 3221 HGNCID:5126 Length:264 Species:Homo sapiens
Sequence 2:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster


Alignment Length:258 Identity:90/258 - (34%)
Similarity:106/258 - (41%) Gaps:109/258 - (42%)


- Green bases have known domain annotations that are detailed below.


Human    12 YIDPKFPPCEEYSQNSYIPEHSPEYYGRTRESGFQHHHQELY------PP--PPPRPSYPERQYS 68
            |.|...|...|..||                    ||:..:|      ||  .||          
  Fly   210 YTDVGVPDVTEVHQN--------------------HHNMGMYQQQSGVPPVGAPP---------- 244

Human    69 CTSLQGPGNSRGHGPAQAGHHHPEK----SQSLCEPAPLSGASASPSPAPPACSQPAPDHPSSAA 129
                ||..: :|.||.|....||.:    ||:     |.|.:|..|||                 
  Fly   245 ----QGMMH-QGQGPPQMHQGHPGQHTPPSQN-----PNSQSSGMPSP----------------- 282

Human   130 SKQPIVYPWMK----KIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIA 190
                 :||||:    |..           |.||.|..|||.|.||||||||:|||||||||||||
  Fly   283 -----LYPWMRSQFGKCQ-----------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA 331

Human   191 HSLCLSERQIKIWFQNRRMKWKKDHRLPNTKVRSAPPAGAAPSTLSAATPGTSEDHSQSATPP 253
            |:|||:|||||||||||||||||::     |.:..|.:|.               .....|||
  Fly   332 HALCLTERQIKIWFQNRRMKWKKEN-----KTKGEPGSGG---------------EGDEITPP 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXC4NP_055435.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 19..130 26/122 (21%)
Antp-type hexapeptide 135..140 3/4 (75%)
Homeobox 159..213 CDD:395001 45/53 (85%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..264 6/40 (15%)
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 39/168 (23%)
Homeobox 301..354 CDD:395001 45/52 (87%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.810

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