DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sec16 and Sec16b

DIOPT Version :9

Sequence 1:NP_001285158.1 Gene:Sec16 / 32209 FlyBaseID:FBgn0052654 Length:2326 Species:Drosophila melanogaster
Sequence 2:XP_038947063.1 Gene:Sec16b / 89868 RGDID:621658 Length:1061 Species:Rattus norvegicus


Alignment Length:1298 Identity:298/1298 - (22%)
Similarity:478/1298 - (36%) Gaps:338/1298 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   819 GEDPDRSYDHSRRYNNSNYEGESDNPEYNHMGDAELDGSGGRSSKTSRHRRSAAEED-FDDYERE 882
            |.....|.|.:||..:.:|. ...:|:|:  ||       ........|:.|..::| .||:::.
  Rat    10 GRTTGPSRDANRRLQSGHYR-PRPHPQYS--GD-------NYHQWQDTHKNSKPQQDPRDDHQQP 64

  Fly   883 R--NRSRRSTKPQSSAEKSRSSGGRRNYENSGRSARADDGRRRYQDQRNPGAQYPVSATGYVPYG 945
            .  .||...::|.|.|:..:.|.....|..||           |:|                ||.
  Rat    65 HYVPRSGEWSQPVSGADYLKGSYPSHPYSRSG-----------YED----------------PYQ 102

  Fly   946 MYEQMS-RNPQVYADMYAKFYGQMINSMNAAVSAAASKGGVPAGAGVIPGLMPSAVPVSAAQLVA 1009
            .|...: |:...|.:.|  ::|.                         |.|              
  Rat   103 SYHTPTPRDEYAYGNYY--YHGH-------------------------PQL-------------- 126

  Fly  1010 ATSGGSVSGSSEAAMLRERERYT-HAYITQANEFHRHQYKE--LIYQQQQQQQQQQQQQQQREDH 1071
                  ..|..|.|:.|:...|. |........|..|.:::  ..::.....|.|...:....|:
  Rat   127 ------PQGEREGAVARQGSPYIWHEDHRDQRHFSEHHWEKHNSTFEANSDTQFQFTSKNPYNDN 185

  Fly  1072 LNSSFSVAEDNASFYGSHGGGSIYNQYQSYPLSSARSLSNLNGDGRNSRCGPYYAGSECGLDIRA 1136
            ..|:|.: |....|:...|.     |.|...|:|..:|...:..|.:|          ...::..
  Rat   186 PASAFGL-EQPGEFFPESGA-----QKQKPSLTSKSNLLQQHESGLSS----------SSYELSQ 234

  Fly  1137 AADAAPSTYGG-VAGTAGPV--TNTAVARPPRRRTPLQFSRPHLVASYAM-SLLLKVKPKYAGRG 1197
            ....||..|.. |:.|..|:  .:|:...|   :.|::|..||:..|:.. ..|:.|.|.....|
  Rat   235 YMTEAPEQYEPMVSATWRPIQADDTSATVP---KAPMRFYVPHVSVSFGPGGQLICVSPNSPADG 296

  Fly  1198 R-----------LRNDVEVAPPRIRDGTSSLLRMYPGPLQGRKLHKDKIISFCKEQIRLGPTKGC 1251
            :           :.||.|         ....:|.:||||....:||..|::||:::         
  Rat   297 QTALVEVHSMEVILNDFE---------DQEEMRAFPGPLIREDIHKVDIMTFCQKK--------- 343

  Fly  1252 TALYATQKKPQGSVTKYRASHALMWHLLILLLRQNGYIADTDVGDLLLEN---QQEYPYDPSEFE 1313
             |....:.:..||     ...||:|.||:||.||||.:..:|:.:||:::   .::|...|....
  Rat   344 -AAQCLKSETPGS-----RDSALLWQLLVLLCRQNGSMVGSDIAELLMQDCKKLEKYKRQPPVAN 402

  Fly  1314 AENEPDADAEQDAAAPADKTVDSDLDSESAAGVTPAEPLAAGAATSSINGADAANAATPLSEQAA 1378
            ..|..|.|                            .|:.:....:.:.|....|..||..   .
  Rat   403 LINLTDED----------------------------WPVLSSGTRNLLTGEIPLNVDTPAQ---I 436

  Fly  1379 TDKFRSYVLRGNVEEALQWATDNGLWTHAFFLALYEDRYALTDVAQKFLNRAIKANDPLQTLYQM 1443
            .:||.:.:..|..:|||:||..|.||.||.|||...|......|...| ...:..|||||||:|:
  Rat   437 VEKFTNLLYYGRKKEALEWAMKNHLWGHALFLASKMDPRTYNWVMSGF-TTTLALNDPLQTLFQL 500

  Fly  1444 KSCHTPACVSQLRDEQWGDWRSHLSILVTNKSRQPEYDRSSVVALGDTLFQRGDIYAAHFCYLVA 1508
            .|...|...:...|:||||||.||:::::|::...|..:.::|::||||..:|.:.|:|||||:|
  Rat   501 MSGRIPQAATCCGDKQWGDWRPHLAVILSNQAGDAELYQRAIVSMGDTLAGKGLVEASHFCYLMA 565

  Fly  1509 QEEFGRYDSSATELTTLTANVPRLILLGSSHYKHFNEFASNEAIIMTEIYEYARSLFDPKFSIAH 1573
            ...||.|          |.....|.|:||:|.:.|.:||:.|||..|||:||.:.|..||..|..
  Rat   566 HVPFGHY----------TVKTDHLALVGSNHSQEFLKFATIEAIQRTEIFEYCQMLGRPKSFIPS 620

  Fly  1574 FQHYKFLLATRILDYGQHFRCTNYLEQIARHIELKPESYDSNFIQRVCGLAERLRYHDPILINRV 1638
            ||.||.|.|:|:.|||...:..:|.|.|...:..:..|.....:..:..|||:|:..||:::.  
  Rat   621 FQVYKLLYASRLADYGLASQALHYCEAIGAAVLSEGGSSHPVLLAELIKLAEKLKLSDPLVLE-- 683

  Fly  1639 SFASPPNATSKDSAAAEEKAWLRQLRSLAYVQPQQEQLQQLQQN--QQVQQEQNDIDQQFAEVNK 1701
                     |:......|..||.|||.      :.::|:|.:..  :......:||.......:.
  Rat   684 ---------SRRGDRVLEPDWLVQLRR------KHKELEQTRTGDLRDPDLTPSDIYGARGTTDT 733

  Fly  1702 QFREL--NMQYESNSNMENTLQPQLPPVDQQPPQQQQQVLSESYQQPTQQYYEPPPQAPTESDPY 1764
            .:|:|  ...|..:|...:.|         .|..:|..:.:.:.|||          .|.:.|.|
  Rat   734 PYRDLYGQQNYSEDSEYSSAL---------WPTSEQTSLTNPTPQQP----------FPLQRDTY 779

  Fly  1765 GQGQPSYYDPNAGQLHYDPNAAQHQYDQQQPQPQPTPSY-------------------------- 1803
            .:        ..|.:|               ...|.|.|                          
  Rat   780 SE--------RDGPVH---------------MGTPVPLYSVPATHLTVISGSSSGSGVAVTGAPG 821

  Fly  1804 GQIEPGTEAYQP----GQATADPAAVPSGYGYDYWSGTQQP--PYGDEPNENQA--ALKDEEEED 1860
            |::  |.|..|.    |:.|....||....|....|..|.|  |.....:|:.|  |.:|||...
  Rat   822 GRV--GEEMLQKHPALGENTVPQEAVQDPDGLAVISSPQTPLAPRDRSFSEDSAISAKEDEEGTS 884

  Fly  1861 EEQDEQQILQYAKQQILQQTKQQQLQQEQHTRSNGAASINNRFKSNALKQERSSG------SLRK 1919
            :..|        |......:::::|:..::|:|:|.... :.|:|.......:||      |...
  Rat   885 DGAD--------KPPHPDASQKEKLRDGKNTKSSGFGWF-SWFRSKPASSVSTSGDEDSVDSSDS 940

  Fly  1920 RQEASRTATIAAAAAAIAQITP--ATVAAAATPPAASAKAFNLNDVSSFSSTNKRHQATSSSNNR 1982
            .||:.|.:            .|  |::..:.|||.:|.   :|...|:|......:....|||:.
  Rat   941 EQESPRAS------------PPHHASLGLSPTPPLSSP---SLPGASTFPRGTGGNSLQGSSNSS 990

  Fly  1983 S----------SSNQAAAAAAATKAAAIATVPAAPNQLLSCRKSNSQNSPYLATPKTLTTPTR 2035
            .          |..|..::...::..|:   |..|....:....|....|.|.|..:|..|.|
  Rat   991 GMAEGVGIGGFSGPQGVSSEFYSQPGAL---PPPPTLQGAVPLYNPSQVPQLPTASSLNRPNR 1050

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec16NP_001285158.1 ACE1-Sec16-like 1371..1631 CDD:187750 97/259 (37%)
Sec16bXP_038947063.1 ACE1-Sec16-like 322..678 CDD:187750 131/412 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344461
Domainoid 1 1.000 170 1.000 Domainoid score I3672
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001693
OrthoInspector 1 1.000 - - otm46007
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR13402
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4658
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.940

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