DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1824 and ABCC12

DIOPT Version :9

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_001319111.1 Gene:ABCC12 / 839921 AraportID:AT1G30410 Length:1498 Species:Arabidopsis thaliana


Alignment Length:672 Identity:174/672 - (25%)
Similarity:290/672 - (43%) Gaps:150/672 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 EGSR---LAIRKEEEEEDTASEQHFDWKRLWTYLEPHLWELIGAVCAALIVAYINIRIPNLLGDL 157
            :|.|   :.|::||.|....|     |..|..|.     |.:|.:...:|:              
plant   880 QGKRRRSVLIKQEERETGIIS-----WNVLMRYK-----EAVGGLWVVMIL-------------- 920

  Fly   158 VNTLARYANTYVMDPINNSFVKDVSKPASNLLSLYMLQS-------GFTFMYIYLLSRVGE---- 211
               ||.|..|.|:         .||  :|..||::..||       || ::.:|.|...|:    
plant   921 ---LACYLATEVL---------RVS--SSTWLSIWTDQSTSKNYSPGF-YIVVYALLGFGQVAVT 970

  Fly   212 ------------QMAAKMRQDLFTQIVVQDIAFFDENRTGELVNRLTADVQDFKTSFKQFVSQGL 264
                        ..|.::...:.:.|:...:.||..|.||.::||.:.|:.|...:....::..:
plant   971 FTNSFWLITSSLHAARRLHDAMLSSILRAPMLFFHTNPTGRVINRFSKDIGDIDRNVANLMNMFM 1035

  Fly   265 RSAAQLIGGSISLFMISPHMAAIAL-ASVPCVVMF-MTYL-----GKKLRSLSKSSQAQAERATG 322
            ....||    :|.|.:...::.|:| |.:|.:::| ..||     .:::|.|...:::......|
plant  1036 NQLWQL----LSTFALIGTVSTISLWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFG 1096

  Fly   323 VCEEALSNIRTVRSSACEYREMQLFEAETNEAARLAQKLGYGIAIFQGLTNFFLNTLVLSTLFMG 387
            .....||:||..::    |..|.....::     :...:.:.:|  ...:|.:| |:.|.||   
plant  1097 EALNGLSSIRAYKA----YDRMAKINGKS-----MDNNIRFTLA--NTSSNRWL-TIRLETL--- 1146

  Fly   388 GHLMSTESLSPGALMAFLVASQGV--------QRSLA--QGSILLGTM-IRGMSAG-----SRVF 436
                       |.:|.:|.|:..|        |...|  .|.:|..|: |..:.:|     ||..
plant  1147 -----------GGVMIWLTATFAVLQNGNTNNQAGFASTMGLLLSYTLNITSLLSGVLRQASRAE 1200

  Fly   437 EFLSLQPQVELLRGYI-IPQERLH--------------GEIRFENVSFAY-PMQPDHLVLKDFSL 485
            ..|:   .||.:..|| :|.|...              |.|:||:|...| |..|.  ||...:.
plant  1201 NSLN---SVERVGNYIDLPSEATDIIENNRPVCGWPSGGSIKFEDVHLRYRPGLPP--VLHGLTF 1260

  Fly   486 TLRPGQTVALVGASGSGKSTIASLVERFYEPSAGNIKLDGYKLSDISPYWLRS--NVLGFIEQQP 548
            .:.|.:.|.:||.:|:|||::.:.:.|..|...|.|.:|.   .|::.:.|..  .||..|.|.|
plant  1261 FVSPSEKVGVVGRTGAGKSSMLNALFRIVEVEKGRIMIDD---CDVAKFGLTDVRRVLSIIPQSP 1322

  Fly   549 VLFGTSILENIRYGKPDAGEEDVYAAARLSQSH--DFVTALPDGYATHVGERGTQLSGGQRQRIA 611
            |||..::..||   .|.:...|......|.::|  |.::..|.|....|.|.|...|.||||.::
plant  1323 VLFSGTVRFNI---DPFSEHNDAGLWEALHRAHIKDVISRNPFGLDAEVCEGGENFSVGQRQLLS 1384

  Fly   612 IARALLKNPRILILDEATSALDATSEAEVQKALDTVVQNRTTLVIAHRLSTIRNADLIVVLDQGR 676
            :|||||:..:||:|||||:::|..:::.:|:.:....::.|.|||||||:||.:.|.|:||..|:
plant  1385 LARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIIDCDKILVLSSGQ 1449

  Fly   677 VVETGKHDELMGK-RGLYFELV 697
            |:|.....||:.: ...:|.:|
plant  1450 VLEYDSPQELLSRDTSAFFRMV 1471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..701 CDD:224055 167/646 (26%)
ABC_membrane 137..415 CDD:279056 62/315 (20%)
ABC_MTABC3_MDL1_MDL2 462..700 CDD:213216 84/242 (35%)
ABCC12NP_001319111.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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