DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and ABCB13

DIOPT Version :10

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_174115.1 Gene:ABCB13 / 839687 AraportID:AT1G27940 Length:1245 Species:Arabidopsis thaliana


Alignment Length:641 Identity:213/641 - (33%)
Similarity:342/641 - (53%) Gaps:77/641 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 SRLAIRKEEEEEDTASEQHFDWKRLWTYLEPHL----WELIGAVCAALIVAYINIRIPNLLGDLV 158
            |...:.:|:.:.|.:.:.......:|..::.:.    :.|:|::.|.|..|    :.|     |.
plant   643 SSFRVDQEKTKNDDSKKDFSSSSMIWELIKLNSPEWPYALLGSIGAVLAGA----QTP-----LF 698

  Fly   159 NTLARYANTYVMDPINNSFVKDVSKPA-----SNLLS--LYMLQSGFTFMYIYLLSRVGEQMAAK 216
            :....|..|....|..|...:||.|.|     :.:::  :|:||.     |.|.|  :||::.::
plant   699 SMGIAYVLTAFYSPFPNVIKRDVEKVAIIFAGAGIVTAPIYLLQH-----YFYTL--MGERLTSR 756

  Fly   217 MRQDLFTQIVVQDIAFF--DENRTGELVNRLTADVQDFKTSFKQFVSQGLRSAAQLIGGSISLFM 279
            :|..||:.|:..:|.:|  |||.||.|.:.|.||....:::....:|..:::.:..:......|.
plant   757 VRLSLFSAILSNEIGWFDLDENNTGSLTSILAADATLVRSALADRLSTIVQNLSLTVTALALAFF 821

  Fly   280 ISPHMAAIALASVPCVV-------MFMT-YLGKKLRSLSKSSQAQAERATGVCEEALSNIRTVRS 336
            .|..:||:..|..|.::       :|:. :.|...|:.|        |||.|..||::|||||.:
plant   822 YSWRVAAVVTACFPLLIAASLTEQLFLKGFGGDYTRAYS--------RATSVAREAIANIRTVAA 878

  Fly   337 SACEYREMQLFEAETNEAARLA------QKLGYGIAIFQGLTNFFLNTLVLSTLFMGGHLMSTES 395
            ...|.:..:.|..|.::..:.|      ...|||::.|....::.|....:|.|.  .|..:...
plant   879 YGAEKQISEQFTCELSKPTKNAFVRGHISGFGYGLSQFLAFCSYALGLWYVSVLI--NHKETNFG 941

  Fly   396 LSPGALMAFLVASQGVQRSLAQGSILLGTMIRGMSAGSRVFEFLSLQPQVELLRGYIIPQE---- 456
            .|..:.|..:|.:..|..:||    |...:::|..|...||..|..:.::.       |.:    
plant   942 DSIKSFMVLIVTAFSVSETLA----LTPDIVKGTQALGSVFRVLHRETKIS-------PDQPNSR 995

  Fly   457 ---RLHGEIRFENVSFAYPMQPDHLVLKDFSLTLRPGQTVALVGASGSGKSTIASLVERFYEPSA 518
               ::.|:|.|.||||.||.:|:..:.|:.:|.:..|:::|:||.|||||||:..|:.|||:||.
plant   996 MVSQVKGDIEFRNVSFVYPTRPEIDIFKNLNLRVSAGKSLAVVGPSGSGKSTVIGLIMRFYDPSN 1060

  Fly   519 GNIKLDGYKLSDISPYWLRS--NVLGFIEQQPVLFGTSILENIRYGKPDAGEEDVYAAARLSQSH 581
            ||:.:||   .||....|||  ..|..::|:|.||.|:|.|||:||..:|.|.::..||:.:.:|
plant  1061 GNLCIDG---QDIKTLNLRSLRKKLALVQQEPALFSTTIYENIKYGNENASEAEIMEAAKAANAH 1122

  Fly   582 DFVTALPDGYATHVGERGTQLSGGQRQRIAIARALLKNPRILILDEATSALDATSEAEVQKALDT 646
            :|:..:.:||.||.|::|.||||||:||:|||||:||:|.:|:|||||||||.:||..||:|||.
plant  1123 EFIIKMEEGYKTHAGDKGVQLSGGQKQRVAIARAVLKDPSVLLLDEATSALDTSSEKLVQEALDK 1187

  Fly   647 VVQNRTTLVIAHRLSTIRNADLIVVLDQGRVVETGKHDELMG-KRGLYFELVRQQE 701
            :::.|||:::||||||||.||.:.||.:|||||.|.|.||:. ..|.|.:|...||
plant  1188 LMKGRTTVLVAHRLSTIRKADTVAVLHKGRVVEKGSHRELVSIPNGFYKQLTSLQE 1243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..702 CDD:440747 210/620 (34%)
ABCB13NP_174115.1 PTZ00265 54..1241 CDD:240339 211/637 (33%)

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