DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and ABCB11

DIOPT Version :10

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_171753.1 Gene:ABCB11 / 839353 AraportID:AT1G02520 Length:1278 Species:Arabidopsis thaliana


Alignment Length:662 Identity:225/662 - (33%)
Similarity:366/662 - (55%) Gaps:48/662 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 RKEEEEEDTASEQHFDWKRLWTYLEPH-----LWELIGAVCAALIVAYINIRIPNLLGDLVNTLA 162
            :|||:.|:.|:...|  .:|:.:.:..     :...|||:...:.:.::.:    |.|||:::..
plant    29 KKEEKSEEKANTVPF--YKLFAFADSSDVLLMICGSIGAIGNGMSLPFMTL----LFGDLIDSFG 87

  Fly   163 RYANTYVMDPINNSFVKDVSKPASNLLSLYMLQSGFTFMYIYLLSRVGEQMAAKMRQDLFTQIVV 227
            :..|       |...|..|||.....:.|.:...|..|:.:......||:.||::|......|:.
plant    88 KNQN-------NKDIVDVVSKVCLKFVYLGLGTLGAAFLQVACWMITGERQAARIRSTYLKTILR 145

  Fly   228 QDIAFFD-ENRTGELVNRLTADVQDFKTSFKQFVSQGLRSAAQLIGGSISLFMISPHMAAIALAS 291
            |||.||| |..|||:|.|::.|....:.:..:.|.:.::..:..:||.:..|:....:..:.|.|
plant   146 QDIGFFDVETNTGEVVGRMSGDTVLIQDAMGEKVGKFIQLVSTFVGGFVLAFIKGWLLTLVMLTS 210

  Fly   292 VPCVVMFMTYLGKKLRSLSKSSQAQAERATGVCEEALSNIRTVRSSACEYREMQLFEAETNEAAR 356
            :|.:.|....:...:...|...||...:|..|.|:.:.:||||.|...|.:.:..::.....|.:
plant   211 IPLLAMAGAAMALIVTRASSRGQAAYAKAATVVEQTIGSIRTVASFTGEKQAINSYKKFITSAYK 275

  Fly   357 LAQKLGYGIAIFQGLTNF-FLNTLVLSTLFMGGHLMSTESLSPGALMAFLVASQGVQRSLAQGSI 420
            .:.:.|:...:..|:..| |.::..|: ::.||.::..:..:.||::..::.......||.|.|.
plant   276 SSIQQGFSTGLGLGVMFFVFFSSYALA-IWFGGKMILEKGYTGGAVINVIIIVVAGSMSLGQTSP 339

  Fly   421 LLGTMIRGMSAGSRVFEFLSLQPQVEL--LRGYIIPQERLHGEIRFENVSFAYPMQPDHLVLKDF 483
            .:.....|.:|..::||.:..:|.::.  :.|.::  |.:.|:|..::|.|:||.:||..:...|
plant   340 CVTAFAAGQAAAYKMFETIKRKPLIDAYDVNGKVL--EDIRGDIELKDVHFSYPARPDEEIFDGF 402

  Fly   484 SLTLRPGQTVALVGASGSGKSTIASLVERFYEPSAGNIKLDGYKLSDISPYWLRSNVLGFIEQQP 548
            ||.:..|.|.||||.|||||||:.||:||||:|.:|.:.:||..|.:....|:||.: |.:.|:|
plant   403 SLFIPSGATAALVGESGSGKSTVISLIERFYDPKSGAVLIDGVNLKEFQLKWIRSKI-GLVSQEP 466

  Fly   549 VLFGTSILENIRYGKPDAGEEDVYAAARLSQSHDFVTALPDGYATHVGERGTQLSGGQRQRIAIA 613
            |||.:||:|||.|||.:|..|::.||..|:.:..|:..||.|..|.|||.||||||||:||||||
plant   467 VLFSSSIMENIAYGKENATVEEIKAATELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRIAIA 531

  Fly   614 RALLKNPRILILDEATSALDATSEAEVQKALDTVVQNRTTLVIAHRLSTIRNADLIVVLDQGRVV 678
            ||:||:||||:||||||||||.||..||:|||.|:.||||:::||||||:||||:|.|:.:|::|
plant   532 RAILKDPRILLLDEATSALDAESERVVQEALDRVMVNRTTVIVAHRLSTVRNADMIAVIHRGKMV 596

  Fly   679 ETGKHDELM-GKRGLYFELVRQQE-RRDIQEQVQAVEDVVAVKEQQATATETSTAATI--ATAAE 739
            |.|.|.||: ...|.|.:|:|.|| .:|::                  .:|.|:.::.  :...:
plant   597 EKGSHSELLKDSEGAYSQLIRLQEINKDVK------------------TSELSSGSSFRNSNLKK 643

  Fly   740 TSAATVTVGSSS 751
            :...|.:||:||
plant   644 SMEGTSSVGNSS 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..702 CDD:440747 211/593 (36%)
ABCB11NP_171753.1 PTZ00265 41..1272 CDD:240339 220/650 (34%)
MdlB 695..1277 CDD:440747
Blue background indicates that the domain is not in the aligned region.

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