DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1824 and PGP10

DIOPT Version :10

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_172538.1 Gene:PGP10 / 837611 AraportID:AT1G10680 Length:1227 Species:Arabidopsis thaliana


Alignment Length:633 Identity:216/633 - (34%)
Similarity:347/633 - (54%) Gaps:69/633 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 AIRKEEEEEDTASEQHFDWKRLWTYLEPHLWELIGAVCAALIVAYINIRIPNL-LGDLVNTLARY 164
            :|.:...:.||..:......||::.:.|. |:.  .:|..|.......::|.. ||     :|:.
plant   630 SIHQSVNQPDTTKQAKVTVGRLYSMIRPD-WKY--GLCGTLGSFIAGSQMPLFALG-----IAQA 686

  Fly   165 ANTYVMD-PINNSFVKDVSKPASNLLSLYMLQSGFTFMYIYLLSR-----VGEQMAAKMRQDLFT 223
            ..:|.|| ....:.||.:|       .|:...|..| :.::.:..     :||::..::||.:|:
plant   687 LVSYYMDWETTQNEVKRIS-------ILFCCGSVIT-VIVHTIEHTTFGIMGERLTLRVRQKMFS 743

  Fly   224 QIVVQDIAFFD--ENRTGELVNRLTADVQDFKTSFKQFVSQGLRSAAQLIGGSISLFMISPHMAA 286
            .|:..:|.:||  :|.:..|.:||.:|....:|......:..|.:...::...|..|:::..:..
plant   744 AILRNEIGWFDKVDNTSSMLASRLESDATLLRTIVVDRSTILLENLGLVVTAFIISFILNWRLTL 808

  Fly   287 IALASVPCVV-------MFMTYLGKKLRSLSKSSQAQAERATGVCEEALSNIRTVRSSACEYREM 344
            :.||:.|.::       :||...|..|      |:|.. :|..:..|::||||||.:...|.:.:
plant   809 VVLATYPLIISGHISEKIFMQGYGGNL------SKAYL-KANMLAGESISNIRTVVAFCAEEKVL 866

  Fly   345 QLFEAETNEAARLAQKLGYGIAIFQGLTNFFLNTLVLSTLFMGGHLM-----STESLSPGALMAF 404
            .|:..|..|.:..:.:.|....|..|::.||:.:.....|:.|..||     |.||:    :..|
plant   867 DLYSKELLEPSERSFRRGQMAGILYGVSQFFIFSSYGLALWYGSILMEKGLSSFESV----MKTF 927

  Fly   405 LVASQGVQRSLAQGSI--LLGTMIRGMSAGSRVFEFLSLQPQV------ELLRGYIIPQERLHGE 461
            :|.   :..:|..|.:  |...:::|......|||.|..:.||      ||        ..:.|.
plant   928 MVL---IVTALVMGEVLALAPDLLKGNQMVVSVFELLDRRTQVVGDTGEEL--------SNVEGT 981

  Fly   462 IRFENVSFAYPMQPDHLVLKDFSLTLRPGQTVALVGASGSGKSTIASLVERFYEPSAGNIKLDGY 526
            |..:.|.|:||.:||..:..||:|.:..|:::||||.||||||::.|||.|||:|:||.|.:||.
plant   982 IELKGVHFSYPSRPDVTIFSDFNLLVPSGKSMALVGQSGSGKSSVLSLVLRFYDPTAGIIMIDGQ 1046

  Fly   527 KLSDISPYWLRSNVLGFIEQQPVLFGTSILENIRYGKPDAGEEDVYAAARLSQSHDFVTALPDGY 591
            .:..:....||.:: |.::|:|.||.|:|.|||.|||..|.|.:|..||:|:.:|.|:::||:||
plant  1047 DIKKLKLKSLRRHI-GLVQQEPALFATTIYENILYGKEGASESEVMEAAKLANAHSFISSLPEGY 1110

  Fly   592 ATHVGERGTQLSGGQRQRIAIARALLKNPRILILDEATSALDATSEAEVQKALDTVVQNRTTLVI 656
            :|.|||||.|:|||||||||||||:||||.||:|||||||||..||..||:|||.::::|||:|:
plant  1111 STKVGERGIQMSGGQRQRIAIARAVLKNPEILLLDEATSALDVESERVVQQALDRLMRDRTTVVV 1175

  Fly   657 AHRLSTIRNADLIVVLDQGRVVETGKHDELM-GKRGLYFELVRQQERR 703
            |||||||:|:|:|.|:..|:::|.|.|:.|: .|.|.|.:|:..|:|:
plant  1176 AHRLSTIKNSDMISVIQDGKIIEQGSHNILVENKNGPYSKLISLQQRQ 1223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..702 CDD:440747 212/612 (35%)
PGP10NP_172538.1 PTZ00265 40..1221 CDD:240339 214/629 (34%)

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