DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1824 and ABCB7

DIOPT Version :9

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_199466.1 Gene:ABCB7 / 834697 AraportID:AT5G46540 Length:1248 Species:Arabidopsis thaliana


Alignment Length:650 Identity:225/650 - (34%)
Similarity:350/650 - (53%) Gaps:86/650 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 LAIRKEEEEEDTASEQHFDWKRLWTYLEPH--LWELIGAVCA---ALIVAYINIRIPNLLGDLVN 159
            :|.:.::::......|...:.:|:|:.:.:  :..:||.:.|   .|...:::|    |:|.|:|
plant     1 MAEKAKKKKNGGGGNQRIAFYKLFTFADRYDIVLMVIGTLSAMANGLTQPFMSI----LMGQLIN 61

  Fly   160 TLARYANTYVMDPINNSFVKDVSKPASNLLSLYMLQSGFTFMYIYLLSRVGEQMAAKMRQDLFTQ 224
            ......:.:|.        |:|||.|...|.|.......:|:.:......||:.:.::|:.....
plant    62 VFGFSDHDHVF--------KEVSKVAVKFLYLAAYAGVVSFLQVSCWMVTGERQSTRIRRLYLKT 118

  Fly   225 IVVQDIAFFD-ENRTGELVNRLTADVQDFKTSFKQFVSQGLRSAAQLIGGSISLFMISPHMAAIA 288
            |:.|||.||| |..|||::.|::.|....:.|..:.|.:..:..:..:||....|::.   ..:.
plant   119 ILRQDIGFFDTETNTGEVIGRMSGDTILIQDSMGEKVGKFTQLVSSFVGGFTVAFIVG---MKLT 180

  Fly   289 LASVPCVVMF------MTYLGKKLRSLSKSSQ----AQAERATGVCEEALSNIRTVRSSACEYRE 343
            ||.:|||.:.      |||:      :||.:|    |..| |..|.::|:.:||||.:...|.:.
plant   181 LALLPCVPLIVGTGGAMTYI------MSKKAQRVQLAYTE-AGNVVQQAVGSIRTVVAFTGEKQS 238

  Fly   344 MQLFEAETNEAARLAQKLG-----------------YGIAIFQGLTNFFLNTLVLSTLFMGGHLM 391
            |..:|.:...|.:...|.|                 ||.||:.|...      ::...:.||.:|
plant   239 MGKYEKKLEIAYKSMVKQGLYSGLGIGIMMVVVYCTYGFAIWYGARQ------IIEKGYTGGQVM 297

  Fly   392 S--TESLSPGALMAFLVASQGVQRSLAQGSIL--LGTMIRGMSAGSRVFEFLSLQPQVEL--LRG 450
            :  |..|:.|               :|.|..|  |.:...|.:|..::||.:..:|:::.  :.|
plant   298 NVITSILTGG---------------MALGQTLPSLNSFAAGTAAAYKMFETIKRKPKIDAYDMSG 347

  Fly   451 YIIPQERLHGEIRFENVSFAYPMQPDHLVLKDFSLTLRPGQTVALVGASGSGKSTIASLVERFYE 515
            .::  |.:.|:|...:|.|.||.:||..:...||||:..|.||||||.|||||||:.||:||||:
plant   348 EVL--EEIKGDIELRDVYFRYPARPDVQIFVGFSLTVPNGMTVALVGQSGSGKSTVISLIERFYD 410

  Fly   516 PSAGNIKLDGYKLSDISPYWLRSNVLGFIEQQPVLFGTSILENIRYGKPDAGEEDVYAAARLSQS 580
            |.:|.:.:||..|......|:||.: |.:.|:|:||.|:|.|||.|||.||.::::..|.:|:.:
plant   411 PESGEVLIDGIDLKKFQVKWIRSKI-GLVSQEPILFATTIRENIVYGKKDASDQEIRTALKLANA 474

  Fly   581 HDFVTALPDGYATHVGERGTQLSGGQRQRIAIARALLKNPRILILDEATSALDATSEAEVQKALD 645
            .:|:..||.|..|.|||.||||||||:||||||||:||||:||:||||||||||.||..||.||.
plant   475 SNFIDKLPQGLETMVGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALV 539

  Fly   646 TVVQNRTTLVIAHRLSTIRNADLIVVLDQGRVVETGKHDELM-GKRGLYFELVRQQERRDIQEQV 709
            .::.:|||:|:||||:|||.||:|.|:.||:|:|.|.|||:: ...|.|.:|||.||....:|.:
plant   540 KLMLSRTTVVVAHRLTTIRTADMIAVVQQGKVIEKGTHDEMIKDPEGTYSQLVRLQEGSKKEEAI 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..701 CDD:224055 220/621 (35%)
ABC_membrane 137..415 CDD:279056 74/310 (24%)
ABC_MTABC3_MDL1_MDL2 462..700 CDD:213216 130/238 (55%)
ABCB7NP_199466.1 PTZ00265 16..1241 CDD:240339 224/634 (35%)
ABC_membrane 39..308 CDD:279056 74/311 (24%)
ABC_MTABC3_MDL1_MDL2 357..595 CDD:213216 130/238 (55%)
ABC_membrane 688..956 CDD:279056
ABC_MTABC3_MDL1_MDL2 1005..1241 CDD:213216
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 88 1.000 Domainoid score I2712
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 1 1.100 - - LDO PTHR24221
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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