DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and ABCB29

DIOPT Version :9

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_196011.1 Gene:ABCB29 / 830269 AraportID:AT5G03910 Length:634 Species:Arabidopsis thaliana


Alignment Length:720 Identity:197/720 - (27%)
Similarity:332/720 - (46%) Gaps:148/720 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RSSDIFSRHLLQPTQQPLPRLQNAARLMRQHLRGTNAPQPPAIPPTNASRLLQTTRLLVWGGGSL 75
            |||.:|.:|..||:.:||...:.:|..:|            |....|:.:.|:|.:..:      
plant    23 RSSSLFLKHPFQPSPRPLSFCKPSALRLR------------ANTTVNSLKALETIKPYL------ 69

  Fly    76 AIGLGARSWWAGHRGAIVHCEGSRLAIRKEEEEEDTASEQHFDWKRLWTYLEPHLWELIGAVCAA 140
                                          :.|..|.                    |:|.:|:.
plant    70 ------------------------------QSESKTV--------------------LLGWLCSC 84

  Fly   141 LIVAYINIRIPNLLGDLVNTLARYANTYVMDPINNSFVKDVSKPASNLLSL-------------- 191
            :.|..::..:|.|                     .||..:::..|::|..|              
plant    85 VSVVSLSQIVPRL---------------------GSFTSNLNANAASLTKLKGECLVLAGLVLAK 128

  Fly   192 ---YMLQSGFTFMYIYLLSRVGEQMAAKMRQDLFTQIVVQDIAFFDENR---TGELVNRLTADVQ 250
               |.||..|       |.........|:|...:.:::.:::.||:...   :|::..|:||:..
plant   129 VVAYYLQQAF-------LWEAALNTVYKIRVFAYRRVLERELEFFEGGNGISSGDIAYRITAEAS 186

  Fly   251 DFKTSFKQFVSQGLRSAAQLIGGSISLFMISPHMAAIALASVPCVVMFMTYLGKKLRSLSKSSQA 315
            :...:....::..:.||.|:...:..:.:.||.:..::...:|.|.:.:.|||.:||.:|:.:|.
plant   187 EVADTIYALLNTVVPSAIQISVMTAHMIVASPALTLVSAMVIPSVALLIAYLGDRLRKISRKAQI 251

  Fly   316 QAERATGVCEEALSNIRTVRSSACEYREMQLFE----AETNEAARLAQKLGYGIAIFQGLTNFFL 376
            .:.:.:....|.|..|..|:::..|..|...|:    |:.:|  |..:|....: |.|.:...:|
plant   252 ASAQLSTYLNEVLPAILFVKANNAEISESVRFQRFARADLDE--RFKKKKMKSL-IPQIVQVMYL 313

  Fly   377 NTLVLSTLFMGGHLMSTESLSPGALMAFLVASQGVQRSLAQGSILLG----TMIRGMSAGSRVFE 437
            .:  ||...:|..:::..|||..|:::| |||........|.   ||    .:.:|..|..|:|:
plant   314 GS--LSIFCVGAVILAGSSLSSSAIVSF-VASLAFLIDPVQD---LGKAYNELKQGEPAIERLFD 372

  Fly   438 FLSLQPQVELLRGYIIPQERLHGEIRFENVSFAYP--MQPDHLVLKDFSLTLRPGQTVALVGASG 500
            ..||:.:| :.|...|..|::.||:...::||.|.  |.|   ||...:|.::.|:||||||.||
plant   373 LTSLESKV-IERPEAIQLEKVAGEVELCDISFKYDENMLP---VLDGLNLHIKAGETVALVGPSG 433

  Fly   501 SGKSTIASLVERFYEPSAGNIKLDGYKLSDISPYWLRSNVLGFIEQQPVLFGTSILENIRYGKPD 565
            .||:|:..|:.|.||||:|:|.:|...:.||....||.:| |.:.|...||..:|.:||.|....
plant   434 GGKTTLIKLLLRLYEPSSGSIIIDKIDIKDIKLESLRKHV-GLVSQDTTLFSGTIADNIGYRDLT 497

  Fly   566 AG--EEDVYAAARLSQSHDFVTALPDGYATHVGERGTQLSGGQRQRIAIARALLKNPRILILDEA 628
            .|  .:.|..||:.:.:.:|:..||:||.|.||.||:.|||||:||:||||||.:...|||||||
plant   498 TGIDMKRVELAAKTANADEFIRNLPEGYNTGVGPRGSSLSGGQKQRLAIARALYQKSSILILDEA 562

  Fly   629 TSALDATSEAEVQKALDTVVQNRTTLVIAHRLSTIRNADLIVVLDQGRVVETGK------HDELM 687
            |||||:.||..|::||:.|:|:.|.:||||||.|:..|..:.::::|::.|..:      |.:.:
plant   563 TSALDSLSELLVREALERVMQDHTVIVIAHRLETVMMAQRVFLVERGKLKELNRSSLLSTHKDSL 627

  Fly   688 GKRGL 692
            ...||
plant   628 TSAGL 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..701 CDD:224055 180/612 (29%)
ABC_membrane 137..415 CDD:279056 61/301 (20%)
ABC_MTABC3_MDL1_MDL2 462..700 CDD:213216 102/241 (42%)
ABCB29NP_196011.1 MdlB 77..613 CDD:224055 176/577 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0058
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.670

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