DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1824 and ABCB20

DIOPT Version :10

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_191092.1 Gene:ABCB20 / 824698 AraportID:AT3G55320 Length:1408 Species:Arabidopsis thaliana


Alignment Length:603 Identity:193/603 - (32%)
Similarity:330/603 - (54%) Gaps:41/603 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 QHFDWKRLWTYLE---PH-LWELIGAVCAALIVAYINIRIPNLLGDLVNTLARYANTYVMDPINN 175
            ||.:....|...:   |. |:.::|::.||:..::             |.|..|....|:.....
plant   815 QHKESPSFWRLAQLSFPEWLYAVLGSLGAAIFGSF-------------NPLLAYVIALVVTEYYK 866

  Fly   176 S----FVKDVSKPASNLLSLYMLQSGFTFMYIYLLSRVGEQMAAKMRQDLFTQIVVQDIAFFD-- 234
            |    ..::|.|....:..:.::.....|:..:....:||:|..::|:.:|:.::..::.:||  
plant   867 SKGGHLREEVDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDDE 931

  Fly   235 ENRTGELVNRLTADVQDFKTSFKQFVSQGLRSAAQLIGGSISLFMISPHMAAIALASVPCVVMFM 299
            ||....|..||..|....:.:|...:|..::.:..:|...:...::...:|.:|||::|  ::.:
plant   932 ENSPDTLSMRLANDATFVRAAFSNRLSIFIQDSFAVIVALLIGLLLGWRLALVALATLP--ILTL 994

  Fly   300 TYLGKK--LRSLSKSSQAQAERATGVCEEALSNIRTVRSSACEYREMQLFEAETNEAARLAQKLG 362
            :.:.:|  |...||..|....:|:.|.|:|:.||.||.:.....:.|:|:..:.....|.:...|
plant   995 SAIAQKLWLAGFSKGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRMQLQRILRQSYLHG 1059

  Fly   363 YGIAIFQGLTNFFL---NTLVLSTLFMG---GHLMSTESLSPGALMAFLVASQGVQRSLAQGSIL 421
            ..|....|.:.|.|   |.|:|....:.   |::..:.:::...:.:|...      :|.:...|
plant  1060 MAIGFAFGFSQFLLFACNALLLWCTALSVNRGYMKLSTAITEYMVFSFATF------ALVEPFGL 1118

  Fly   422 LGTMIRGMSAGSRVFEFLSLQPQVELLRGYIIPQERLHGEIRFENVSFAYPMQPDHLVLKDFSLT 486
            ...:::...:...|||.:...|.:|......:....::|.|..:||.|.||.:|:.|||.:|||.
plant  1119 APYILKRRKSLISVFEIVDRVPTIEPDDNSALKPPNVYGSIELKNVDFCYPTRPEILVLSNFSLK 1183

  Fly   487 LRPGQTVALVGASGSGKSTIASLVERFYEPSAGNIKLDGYKLSDISPYWLRSNVLGFIEQQPVLF 551
            :..|||||:||.||||||||.|||||:|:|.||.:.|||..|...:..||||: :|.::|:|::|
plant  1184 ISGGQTVAVVGVSGSGKSTIISLVERYYDPVAGQVLLDGRDLKLYNLRWLRSH-MGLVQQEPIIF 1247

  Fly   552 GTSILENIRYGKPDAGEEDVYAAARLSQSHDFVTALPDGYATHVGERGTQLSGGQRQRIAIARAL 616
            .|:|.|||.|.:.:|.|.::..|||::.:|.|:::||.||.||:|.||.:|:.||:|||||||.:
plant  1248 STTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHIGMRGVELTPGQKQRIAIARVV 1312

  Fly   617 LKNPRILILDEATSALDATSEAEVQKALDTVVQ-NRTTLVIAHRLSTIRNADLIVVLDQGRVVET 680
            |||..|:::|||:|::::.|...||:||||::. |:||::||||.:.:|:.|.||||:.||:||.
plant  1313 LKNAPIILIDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEE 1377

  Fly   681 GKHDELMGKRGLYFELVR 698
            |.||.|..|.|||..|::
plant  1378 GTHDSLAAKNGLYVRLMQ 1395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..702 CDD:440747 191/599 (32%)
ABCB20NP_191092.1 MdlB 85..646 CDD:440747
MdlB 821..1393 CDD:440747 190/593 (32%)
Blue background indicates that the domain is not in the aligned region.

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