DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and ABCB4

DIOPT Version :10

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_182223.1 Gene:ABCB4 / 819314 AraportID:AT2G47000 Length:1286 Species:Arabidopsis thaliana


Alignment Length:675 Identity:238/675 - (35%)
Similarity:368/675 - (54%) Gaps:58/675 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 KEEEEE----DTASEQHFDWK-----RLWTYLEPHLWEL-----IGAVCAALIVAYINIRIPNLL 154
            ||||||    :...|:|...|     :|:.:.:...:.|     :|::...|....:.:    |.
plant    24 KEEEEEVKKTEKKDEEHEKTKTVPFYKLFAFADSFDFLLMILGTLGSIGNGLGFPLMTL----LF 84

  Fly   155 GDLVNTLARYANTYVMDPINNSFVKDVSKPASNLLSLYMLQSGFTFMYIYLLSRVGEQMAAKMRQ 219
            |||::.... ..|...|.::...:|.|........:.::..||      :::|  ||:.||::|.
plant    85 GDLIDAFGE-NQTNTTDKVSKVALKFVWLGIGTFAAAFLQLSG------WMIS--GERQAARIRS 140

  Fly   220 DLFTQIVVQDIAFFD-ENRTGELVNRLTADVQDFKTSFKQFVSQGLRSAAQLIGGSISLFMISPH 283
            .....|:.||||||| :..|||:|.|::.|....:.:..:.|.:.::..|..:||.:..|:....
plant   141 LYLKTILRQDIAFFDIDTNTGEVVGRMSGDTVLIQDAMGEKVGKAIQLLATFVGGFVIAFVRGWL 205

  Fly   284 MAAIALASVPCVVMFMTYLGKKLRSLSKSSQAQAERATGVCEEALSNIRTVRSSACEYREMQLFE 348
            :..:.|:|:|.:||....|...:...:...|....:|..|.|:.:.:||||.|...|.:.:..: 
plant   206 LTLVMLSSIPLLVMAGALLAIVIAKTASRGQTAYAKAATVVEQTIGSIRTVASFTGEKQAISNY- 269

  Fly   349 AETNEAARLAQKLGYGIAIFQGLTNFFLNTLVL-------STLFMGGHLMSTESLSPGALMAFLV 406
               |:....|.|.|   .|..|.|...|.||.|       ..::.||.|:..:..:.|.::..::
plant   270 ---NKHLVTAYKAG---VIEGGSTGLGLGTLFLVVFCSYALAVWYGGKLILDKGYTGGQVLNIII 328

  Fly   407 ASQGVQRSLAQGSILLGTMIRGMSAGSRVFEFLSLQPQVE--LLRGYIIPQERLHGEIRFENVSF 469
            |......||.|.|..|.....|.:|..::||.:..:|.::  ...|.::  :.:.|:|..::|.|
plant   329 AVLTGSMSLGQTSPCLSAFAAGQAAAYKMFETIERRPNIDSYSTNGKVL--DDIKGDIELKDVYF 391

  Fly   470 AYPMQPDHLVLKDFSLTLRPGQTVALVGASGSGKSTIASLVERFYEPSAGNIKLDGYKLSDISPY 534
            .||.:||..:.:.|||.:..|.||||||.|||||||:.||:||||:|.||::.:||..|.:....
plant   392 TYPARPDEQIFRGFSLFISSGTTVALVGQSGSGKSTVVSLIERFYDPQAGDVLIDGINLKEFQLK 456

  Fly   535 WLRSNVLGFIEQQPVLFGTSILENIRYGKPDAGEEDVYAAARLSQSHDFVTALPDGYATHVGERG 599
            |:||.: |.:.|:||||..||.:||.|||.||..|::.|||.|:.:..||..||.|..|.|||.|
plant   457 WIRSKI-GLVSQEPVLFTASIKDNIAYGKEDATTEEIKAAAELANASKFVDKLPQGLDTMVGEHG 520

  Fly   600 TQLSGGQRQRIAIARALLKNPRILILDEATSALDATSEAEVQKALDTVVQNRTTLVIAHRLSTIR 664
            |||||||:||||:|||:||:||||:||||||||||.||..||:|||.::.||||:|:||||||:|
plant   521 TQLSGGQKQRIAVARAILKDPRILLLDEATSALDAESERVVQEALDRIMVNRTTVVVAHRLSTVR 585

  Fly   665 NADLIVVLDQGRVVETGKHDELM-GKRGLYFELVRQQERRDIQEQVQAVEDVVAVKEQQATATET 728
            |||:|.|:.||::||.|.|.||: ...|.|.:|:|.||.:...|.        |.:||:.::.|:
plant   586 NADMIAVIHQGKIVEKGSHTELLKDPEGAYSQLIRLQEEKKSDEN--------AAEEQKMSSIES 642

  Fly   729 STAATIATAAETSAATVTVGSSSFG 753
            ...:::..:  :...:::.|.||.|
plant   643 FKQSSLRKS--SLGRSLSKGGSSRG 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..702 CDD:440747 220/603 (36%)
ABCB4NP_182223.1 PTZ00265 46..1280 CDD:240339 229/653 (35%)
MdlB 705..1285 CDD:440747
Blue background indicates that the domain is not in the aligned region.

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