DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and ABCB6

DIOPT Version :10

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_181480.1 Gene:ABCB6 / 818533 AraportID:AT2G39480 Length:1407 Species:Arabidopsis thaliana


Alignment Length:721 Identity:217/721 - (30%)
Similarity:372/721 - (51%) Gaps:86/721 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GRSSDIFSRHLLQPT-------QQPLPRLQ--NAARLMRQHLRGTNAPQPPAIP-----PTNASR 60
            |.|.|:..:   :||       :..||.|.  :.....||...|:: |:.|..|     |.|...
plant   728 GSSLDVGEK---EPTIKRQDSFEMRLPELPKIDIQCPQRQKSNGSD-PESPISPLLISDPQNERS 788

  Fly    61 LLQTTRLLVWGGGSLAIGLGARSWWAGHRGAIVHCEGSRLAIR--KEEEEEDTASEQHFDWKRLW 123
            ..||.        |..:|               |.:.:..:::  |:.:.::..|    .|:...
plant   789 HSQTF--------SRPLG---------------HSDDTSASVKVAKDGQHKEPPS----FWRLAQ 826

  Fly   124 TYLEPHLWELIGAVCAAL------IVAYINIRIPNLLGDLVNTLARYANTYVMDPINNSFVKDVS 182
            ......|:.::|::.||:      ::||:              :|....||.... .:...::|.
plant   827 LSFPEWLYAVLGSIGAAIFGSFNPLLAYV--------------IALVVTTYYTSK-GSHLREEVD 876

  Fly   183 KPASNLLSLYMLQSGFTFMYIYLLSRVGEQMAAKMRQDLFTQIVVQDIAFFD--ENRTGELVNRL 245
            |....:..:.::.....|:..:....:||:|..::|:.:|:.::..::.::|  ||....|..||
plant   877 KWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWYDEEENSPDTLSMRL 941

  Fly   246 TADVQDFKTSFKQFVSQGLRSAAQLIGGSISLFMISPHMAAIALASVPCVVMFMTYLGKK--LRS 308
            ..|....:.:|...:|..::.:..:|...:...::...:|.:|||::|  |:.::.:.:|  |..
plant   942 ANDATFVRAAFSNRLSIFIQDSFAVIVAILIGLLLGWRLALVALATLP--VLTLSAIAQKLWLAG 1004

  Fly   309 LSKSSQAQAERATGVCEEALSNIRTVRSSACEYREMQLFEAETNEAARLAQKLGYGIAIFQGLTN 373
            .||..|....:|:.|.|:|:.||.||.:.....:.|:|:..:.....|.:...|..|....|.:.
plant  1005 FSKGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLQRILRQSFFHGMAIGFAFGFSQ 1069

  Fly   374 FFL---NTLVL--STLFMGGHLMSTESLSPGALMAFLVASQGVQRSLAQGSILLGTMIRGMSAGS 433
            |.|   |.|:|  :.|.:....|...:    ||..::|.|... .:|.:...|...:::...:.:
plant  1070 FLLFACNALLLWYTALSVDRRYMKLST----ALTEYMVFSFAT-FALVEPFGLAPYILKRRRSLA 1129

  Fly   434 RVFEFLSLQPQVELLRGYIIPQERLHGEIRFENVSFAYPMQPDHLVLKDFSLTLRPGQTVALVGA 498
            .|||.:...|.:|......:....::|.|..:|:.|.||.:|:.|||.:|||.:..|||||:||.
plant  1130 SVFEIIDRVPTIEPDDTSALSPPNVYGSIELKNIDFCYPTRPEVLVLSNFSLKVNGGQTVAVVGV 1194

  Fly   499 SGSGKSTIASLVERFYEPSAGNIKLDGYKLSDISPYWLRSNVLGFIEQQPVLFGTSILENIRYGK 563
            ||||||||.||:||:|:|.||.:.|||..|...:..||||: :|.|:|:|::|.|:|.|||.|.:
plant  1195 SGSGKSTIISLIERYYDPVAGQVLLDGRDLKSYNLRWLRSH-MGLIQQEPIIFSTTIRENIIYAR 1258

  Fly   564 PDAGEEDVYAAARLSQSHDFVTALPDGYATHVGERGTQLSGGQRQRIAIARALLKNPRILILDEA 628
            .:|.|.::..|||::.:|.|:::||.||.||:|.||.:|:.||:|||||||.:|||..||::|||
plant  1259 HNASEAEMKEAARIANAHHFISSLPHGYDTHIGMRGVELTQGQKQRIAIARVVLKNAPILLIDEA 1323

  Fly   629 TSALDATSEAEVQKALDTVVQ-NRTTLVIAHRLSTIRNADLIVVLDQGRVVETGKHDELMGKRGL 692
            :|::::.|...||:||||::. |:||::||||::.:|:.|.||||:.|::||.|.||.|.||.||
plant  1324 SSSIESESSRVVQEALDTLIMGNKTTILIAHRVAMMRHVDNIVVLNGGKIVEEGTHDCLAGKNGL 1388

  Fly   693 YFELVR 698
            |..|::
plant  1389 YVRLMQ 1394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..702 CDD:440747 194/596 (33%)
ABCB6NP_181480.1 MdlB 83..644 CDD:440747
MdlB 820..1392 CDD:440747 194/598 (32%)
Blue background indicates that the domain is not in the aligned region.

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