DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1824 and ABCB1

DIOPT Version :9

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_181228.1 Gene:ABCB1 / 818265 AraportID:AT2G36910 Length:1286 Species:Arabidopsis thaliana


Alignment Length:673 Identity:236/673 - (35%)
Similarity:352/673 - (52%) Gaps:71/673 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 EEEDTASEQHFDWKRLWTYLEPHLWELIGAVCAALIVAYIN-IRIPNLL---GDLVNTLARYANT 167
            ||...|..:...:|.|:.:.:...:.|:|   ...:.|::: ..:|..|   .||||:....:| 
plant    17 EEPKKAEIRGVAFKELFRFADGLDYVLMG---IGSVGAFVHGCSLPLFLRFFADLVNSFGSNSN- 77

  Fly   168 YVMDPINNSFVKDVSKPASNLL--SLYML-------QSGFTFMYIYLLSRVGEQMAAKMRQDLFT 223
                        :|.|....:|  :||.|       .|.:..:..::.|  ||:...|||.....
plant    78 ------------NVEKMMEEVLKYALYFLVVGAAIWASSWAEISCWMWS--GERQTTKMRIKYLE 128

  Fly   224 QIVVQDIAFFD-ENRTGELVNRLTADVQDFKTSFKQFVSQGLRSAAQLIGGSISLFMISPHMAAI 287
            ..:.|||.||| |.||.::|..:..|....:.:..:.:...:...|..:.|.|..|.....:|.:
plant   129 AALNQDIQFFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFIVGFTAVWQLALV 193

  Fly   288 ALASVPCVVMFMTYLGKKLRSLSKSSQAQAERATGVCEEALSNIRTVRSSACEYREMQLFEAETN 352
            .||.||.:.:........|..||..||....:|..:.|:.:..||.|.:...|.|..|.:    :
plant   194 TLAVVPLIAVIGGIHTTTLSKLSNKSQESLSQAGNIVEQTVVQIRVVMAFVGESRASQAY----S 254

  Fly   353 EAARLAQKLGY--GIAIFQGL--TNFFLNTLVLSTLFMGGHLMSTESLSPGALMAFLVASQGVQR 413
            .|.::||||||  |:|...||  |.|.:.......|:.||:|:.....:.|..:|.:.|......
plant   255 SALKIAQKLGYKTGLAKGMGLGATYFVVFCCYALLLWYGGYLVRHHLTNGGLAIATMFAVMIGGL 319

  Fly   414 SLAQGSILLGTMIRGMSAGSRVFEFLSLQPQVELLRGYIIPQERLHGEIRFENVSFAYPMQPDHL 478
            :|.|.:..:....:...|.:::|..:..:|.:|......:..:.:.|.:..:||.|:||.:||..
plant   320 ALGQSAPSMAAFAKAKVAAAKIFRIIDHKPTIERNSESGVELDSVTGLVELKNVDFSYPSRPDVK 384

  Fly   479 VLKDFSLTLRPGQTVALVGASGSGKSTIASLVERFYEPSAGNIKLDGYKLSDISPYWLRSNVLGF 543
            :|.:|.|::..|:|:||||:|||||||:.||:||||:|::|.:.|||..|..:...|||..: |.
plant   385 ILNNFCLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPNSGQVLLDGQDLKTLKLRWLRQQI-GL 448

  Fly   544 IEQQPVLFGTSILENIRYGKPDAGEEDVYAAARLSQSHDFVTALPDGYATHVGERGTQLSGGQRQ 608
            :.|:|.||.|||.|||..|:|||.:.::..|||::.:|.|:..||||:.|.|||||.||||||:|
plant   449 VSQEPALFATSIKENILLGRPDADQVEIEEAARVANAHSFIIKLPDGFDTQVGERGLQLSGGQKQ 513

  Fly   609 RIAIARALLKNPRILILDEATSALDATSEAEVQKALDTVVQNRTTLVIAHRLSTIRNADLIVVLD 673
            |||||||:||||.||:|||||||||:.||..||:|||..:..||||:|||||||||.|||:.||.
plant   514 RIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLIIAHRLSTIRKADLVAVLQ 578

  Fly   674 QGRVVETGKHDELM--GKRGLYFELVRQQERRDIQEQVQAVEDVVAVKEQQATATETSTAATIAT 736
            ||.|.|.|.||||.  |:.|:|.:|::.||                      .|.||:.:....:
plant   579 QGSVSEIGTHDELFSKGENGVYAKLIKMQE----------------------AAHETAMSNARKS 621

  Fly   737 AAETSAATVTVGS------SSFG 753
            :|..|:|..:|.|      ||:|
plant   622 SARPSSARNSVSSPIMTRNSSYG 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..701 CDD:224055 220/601 (37%)
ABC_membrane 137..415 CDD:279056 74/295 (25%)
ABC_MTABC3_MDL1_MDL2 462..700 CDD:213216 135/239 (56%)
ABCB1NP_181228.1 PTZ00265 43..1264 CDD:240339 231/647 (36%)
ABC_membrane 49..319 CDD:279056 74/288 (26%)
ABC_MTABC3_MDL1_MDL2 368..607 CDD:213216 135/239 (56%)
ABC_membrane 705..970 CDD:279056
ABC_MTABC3_MDL1_MDL2 1024..1263 CDD:213216
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 1 1.100 - - O PTHR24221
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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