DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and abcb11a

DIOPT Version :9

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:XP_009303249.2 Gene:abcb11a / 797269 ZFINID:ZDB-GENE-050517-13 Length:1320 Species:Danio rerio


Alignment Length:662 Identity:213/662 - (32%)
Similarity:345/662 - (52%) Gaps:76/662 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 IVHCEGSRLAIRKEEEEEDTASEQHFDWKRLWTYLEPHLWELIGAVCA--------ALIVAYINI 148
            |.:.|.:.|...:.:::|...:...|...|..|:.|. |..::|:.|:        .:::.|   
Zfish    16 IYNAEDADLKNGEVKKKEKAPTVGFFQLFRFSTWREV-LMMVVGSFCSLVHGAATPLMLLVY--- 76

  Fly   149 RIPNLLGDLVNTLARYANTY--VMDP-----------INNSFVK-----------DVSKPASNLL 189
                  |.:.||...|....  :.||           :|.|.|:           |:....:| .
Zfish    77 ------GMMTNTFVEYEVEILELTDPNKTCINNTISWMNGSAVQRPDNTTIYCGVDIEAEMTN-F 134

  Fly   190 SLYMLQSG-----FTFMYIYLLSRVGEQMAAKMRQDLFTQIVVQDIAFFDENRTGELVNRLTADV 249
            :||.:..|     .:|..|........:...::|:..|.:|:..:|.:||.|..|||..|::.|:
Zfish   135 ALYYIGIGVGVLILSFFQITFWVSAAARQIQRIRKTYFRKIMCMEIGWFDCNSVGELNTRMSDDI 199

  Fly   250 QDFKTSFKQFVSQGLRSAAQLIGG-----------SISLFMISPHMAAIALASVPCVVMFMTYLG 303
            .....:....||..:...:..|.|           ::.:..:|| :..:|...:...|..:|  |
Zfish   200 NKINNAIADQVSIFIERISTFIFGFMVGFIGGWKLTLVVIAVSP-LLGLAAGLMAMAVARLT--G 261

  Fly   304 KKLRSLSKSSQAQAERATGVCEEALSNIRTVRSSACEYREMQLFEAETNEAARLAQKLGYGIAIF 368
            ::|::.:|        |..|.:|.||:||||.:...|::|.:.::....:|.....|.|..|.:|
Zfish   262 RELKAYAK--------AGAVADEVLSSIRTVAAFGGEHKEAERYDRNLVQAQEWGIKKGMIIGVF 318

  Fly   369 QGLTNFFLNTLVLSTLFMGGHL-MSTESLSPGALMAFLVASQGVQRSLAQGSILLGTMIRGMSAG 432
            ||.....:........:.|..| :.|:.|:||.|:...........:|.|.|..|.....|.:|.
Zfish   319 QGYLWCIIFLCYALAFWFGSKLVIETQELTPGGLVQVFFGVLIGAMNLGQASPCLEAFASGRAAA 383

  Fly   433 SRVFEFLSLQPQVELL--RGYIIPQERLHGEIRFENVSFAYPMQPDHLVLKDFSLTLRPGQTVAL 495
            ..:|:.:..:|:::..  .|:.:  :::.|:|.|.:|:|.||.:|:..:|.|.::.::.|:|.|.
Zfish   384 KSIFDTIDREPEIDCFSDEGHTL--DKVKGDIEFHSVNFNYPSRPEVKILDDLNIVVKAGETTAF 446

  Fly   496 VGASGSGKSTIASLVERFYEPSAGNIKLDGYKLSDISPYWLRSNVLGFIEQQPVLFGTSILENIR 560
            ||.|||||:|...|::|||:||.|.:.|||:.:..::..|||| ::|.:||:||||.|:|.||||
Zfish   447 VGPSGSGKTTTIQLIQRFYDPSEGMVSLDGHDIRSLNIQWLRS-LIGVVEQEPVLFATTIAENIR 510

  Fly   561 YGKPDAGEEDVYAAARLSQSHDFVTALPDGYATHVGERGTQLSGGQRQRIAIARALLKNPRILIL 625
            ||:.....:::..||:.:.:::|:.:||..:.|.|||.|.|:||||:|||||||||::|||||:|
Zfish   511 YGRAGVTMQEIIEAAKQANAYNFIMSLPQTFDTLVGEGGGQMSGGQKQRIAIARALVRNPRILLL 575

  Fly   626 DEATSALDATSEAEVQKALDTVVQNRTTLVIAHRLSTIRNADLIVVLDQGRVVETGKHDELMGKR 690
            |.||||||..|||.||:|||...|.|||:.||||||||||||:||..:.||.||.|.|.:|:.|:
Zfish   576 DMATSALDNESEAVVQEALDKARQGRTTISIAHRLSTIRNADVIVGFEHGRAVERGTHSQLLDKK 640

  Fly   691 GLYFELVRQQER 702
            |:||.||..|.:
Zfish   641 GVYFTLVTLQNQ 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..701 CDD:224055 207/632 (33%)
ABC_membrane 137..415 CDD:279056 67/326 (21%)
ABC_MTABC3_MDL1_MDL2 462..700 CDD:213216 125/237 (53%)
abcb11aXP_009303249.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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