DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1824 and Abcb8

DIOPT Version :9

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_083296.2 Gene:Abcb8 / 74610 MGIID:1351667 Length:717 Species:Mus musculus


Alignment Length:700 Identity:342/700 - (48%)
Similarity:456/700 - (65%) Gaps:31/700 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LRLLVSNCGRSS-DIFSRHLLQPTQQPLPRLQNAARLMRQHLRGTNAPQPPAIPPTNASRLLQTT 65
            ||....:..||| |..|.|||:...|  .|:|     :|.||        |..||.:.    .:.
Mouse    23 LRFQTFSAARSSDDRLSSHLLRTVAQ--LRVQ-----LRAHL--------PRAPPASH----WSP 68

  Fly    66 RLLVWGGGSLAIGLGARSWWAGHRGAIVHCEGSRLAIRKEEEEEDTASEQHFDWKRLWTYLEPHL 130
            ....|.||:|.:  .|..|.......|..||    |......:...|.|..|:||..|.:|.|||
Mouse    69 SAWCWVGGTLVV--PAVLWQHPRLCLIALCE----AKESPPAQPTRAPELRFNWKLFWHFLHPHL 127

  Fly   131 WELIGAVCAALIVAYINIRIPNLLGDLVNTLARYANTYVMDPINNSFVKDVSKPASNLLSLYMLQ 195
            ..|..|:..||..|.:|::||.|||.||..:|:|...::     .|||.:..|.:..||.||.:|
Mouse   128 LALGAAIVLALGAALVNVQIPLLLGQLVEIVAKYTRDHM-----GSFVSESRKLSVQLLLLYGVQ 187

  Fly   196 SGFTFMYIYLLSRVGEQMAAKMRQDLFTQIVVQDIAFFDENRTGELVNRLTADVQDFKTSFKQFV 260
            ...||.|:.|||.:||:||..||:.||:.::.|||||||..:||:||:|||.|||:||:|||..:
Mouse   188 GLLTFGYLVLLSHIGERMAMDMRKALFSSLLRQDIAFFDAKKTGQLVSRLTTDVQEFKSSFKLVI 252

  Fly   261 SQGLRSAAQLIGGSISLFMISPHMAAIALASVPCVVMFMTYLGKKLRSLSKSSQAQAERATGVCE 325
            ||||||..|:||..:||.|:||.:..:.....|.::...|.:|..||.||:..|.|..|||||.:
Mouse   253 SQGLRSCTQVIGSLVSLSMLSPRLTLMLAVVTPALMGVGTLMGSGLRKLSRQCQEQIARATGVAD 317

  Fly   326 EALSNIRTVRSSACEYREMQLFEAETNEAARLAQKLGYGIAIFQGLTNFFLNTLVLSTLFMGGHL 390
            |||.|:||||:.|.|.||.:.::||.......|::||.|||:||||:|...|.:||.|||:||.|
Mouse   318 EALGNVRTVRAFAMEKREEERYQAELESCCCKAEELGRGIALFQGLSNIAFNCMVLGTLFIGGSL 382

  Fly   391 MSTESLSPGALMAFLVASQGVQRSLAQGSILLGTMIRGMSAGSRVFEFLSLQPQVELLRGYIIPQ 455
            ::.:.|..|.||:||||||.||||:|..|:|.|.::||:|||:||||:::|.|.:.|..||.||.
Mouse   383 VAGQQLKGGDLMSFLVASQTVQRSMASLSVLFGQVVRGLSAGARVFEYMALSPVIPLTGGYCIPN 447

  Fly   456 ERLHGEIRFENVSFAYPMQPDHLVLKDFSLTLRPGQTVALVGASGSGKSTIASLVERFYEPSAGN 520
            :.:.|.|.|:||:|:||.:|...|||||:|.|..|:.|||||.||.||:|:|||:||||:|.||:
Mouse   448 KDIRGSITFQNVTFSYPCRPGFNVLKDFTLKLPSGKIVALVGQSGGGKTTVASLLERFYDPEAGS 512

  Fly   521 IKLDGYKLSDISPYWLRSNVLGFIEQQPVLFGTSILENIRYGKPDAGEEDVYAAARLSQSHDFVT 585
            :.|||:.|..::|.|||..|:|||.|:||||.|:|:||||:||.||.:|:||.|||.:.:|:|::
Mouse   513 VTLDGHDLRTLNPSWLRGQVIGFISQEPVLFATTIMENIRFGKLDASDEEVYTAAREANAHEFIS 577

  Fly   586 ALPDGYATHVGERGTQLSGGQRQRIAIARALLKNPRILILDEATSALDATSEAEVQKALDTVVQN 650
            :.||||:|.||||||.|||||:||:||||||:|.|.:||||||||||||.||..||:|||.....
Mouse   578 SFPDGYSTVVGERGTTLSGGQKQRLAIARALIKQPTVLILDEATSALDAESERVVQEALDRASAG 642

  Fly   651 RTTLVIAHRLSTIRNADLIVVLDQGRVVETGKHDELMGKRGLYFELVRQQ 700
            ||.|||||||||:|.|..|:|:..|:|.|.|.|:||:.|.|||.||:|:|
Mouse   643 RTVLVIAHRLSTVRAAHSIIVMANGQVCEAGTHEELLKKGGLYSELIRRQ 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..701 CDD:224055 309/581 (53%)
ABC_membrane 137..415 CDD:279056 133/277 (48%)
ABC_MTABC3_MDL1_MDL2 462..700 CDD:213216 145/237 (61%)
Abcb8NP_083296.2 MdlB 116..695 CDD:224055 309/581 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 695..717
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 243 1.000 Domainoid score I2209
eggNOG 1 0.900 - - E2759_KOG0058
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5203
Inparanoid 1 1.050 614 1.000 Inparanoid score I903
Isobase 1 0.950 - 0 Normalized mean entropy S1465
OMA 1 1.010 - - QHG54509
OrthoDB 1 1.010 - - D684058at2759
OrthoFinder 1 1.000 - - FOG0000243
OrthoInspector 1 1.000 - - oto94190
orthoMCL 1 0.900 - - OOG6_100059
Panther 1 1.100 - - LDO PTHR24221
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4240
SonicParanoid 1 1.000 - - X5381
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.820

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