DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and Abcb9

DIOPT Version :9

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_071574.1 Gene:Abcb9 / 63886 RGDID:620254 Length:762 Species:Rattus norvegicus


Alignment Length:675 Identity:234/675 - (34%)
Similarity:352/675 - (52%) Gaps:97/675 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 LLVWGGGSLAI-----GL------GARSWWAGHRGAIVHCEGSRLAIRKEEEEEDTASEQHFDWK 120
            |.||...|||.     ||      .|.:...|:.|  .|.||...|     |:...|:.|     
  Rat   119 LFVWTYISLAASFLLWGLLATVRPDAEALEPGNEG--FHGEGGAPA-----EQASGATLQ----- 171

  Fly   121 RLWTYLEPHLWELIGAVCAALIVAYINIRIPNLLGDLVNTLARYANTYVMDPINNSFVKDVSKPA 185
            :|.:|.:|.:..|:.|....::.|.....:|...|..::::       |:....:.|.       
  Rat   172 KLLSYTKPDVAFLVAASFFLIVAALGETFLPYYTGRAIDSI-------VIQKSMDQFT------- 222

  Fly   186 SNLLSLYMLQSGFTFMYIYLLSRVGEQMAA----------------KMRQDLFTQIVVQDIAFFD 234
                         |.:.:..|..:|..:||                ::|..||..:|.|:.:|||
  Rat   223 -------------TAVVVVCLLAIGSSLAAGIRGGIFTLVFARLNIRLRNCLFRSLVSQETSFFD 274

  Fly   235 ENRTGELVNRLTADVQDFKTSFKQFVSQG----LRSAAQLIGGSISLFMISPHMAAIALASVPCV 295
            |||||:|::|||:|.    |.....|||.    ||:..::.|..:.:|.:|..::.:.....|.:
  Rat   275 ENRTGDLISRLTSDT----TMVSDLVSQNINIFLRNTVKVTGVVVFMFSLSWQLSLVTFMGFPII 335

  Fly   296 VMFMTYLGKKLRSLSKSSQAQAERATGVCEEALSNIRTVRSSACEYREMQLFEAETNEAARLAQK 360
            :|.....||..:.|||..|:...||:...||.:|.::||||.|.|..|.::|..:..:..:|.:|
  Rat   336 MMVSNIYGKYYKRLSKEVQSALARASTTAEETISAMKTVRSFANEEEEAEVFLRKLQQVYKLNRK 400

  Fly   361 LGYGIAIF---QGLTNFFLNTLVLSTLFMGGHLMSTESLSPGALMAFLV-------ASQGVQRSL 415
            .......:   .|||   |..:.:|.|:.||||:.:..:|.|.|:||::       ..:.|    
  Rat   401 EAAAYMSYVWGSGLT---LLVVQVSILYYGGHLVISGQMSSGNLIAFIIYEFVLGDCMESV---- 458

  Fly   416 AQGSILLGTMIRGMSAGSRVFEFLSLQPQVELLRGYIIPQERLHGEIRFENVSFAYPMQPDHLVL 480
              ||:..|.| :|:.|..:||||:..||.: :..|.:.| :.|.|.:.||||:|.|..:|...||
  Rat   459 --GSVYSGLM-QGVGAAEKVFEFIDRQPTM-VHDGRLAP-DHLEGRVDFENVTFTYRTRPHTQVL 518

  Fly   481 KDFSLTLRPGQTVALVGASGSGKSTIASLVERFYEPSAGNIKLDGYKLSDISPYWLRSNVLGFIE 545
            ::.|.:|.||:..||||.||||||:..:::|.||....|.:.|||..:......:|. .|:..:.
  Rat   519 QNVSFSLSPGKVTALVGPSGSGKSSCVNILENFYPLQGGRVLLDGEPIGAYDHKYLH-RVISLVS 582

  Fly   546 QQPVLFGTSILENIRYGKPDAGEEDVYAAARLSQSHDFVTALPDGYATHVGERGTQLSGGQRQRI 610
            |:||||..||.:||.||.|....|.|..||:.:.:|.|:..|.|||:|..||:|.||||||:||:
  Rat   583 QEPVLFARSITDNISYGLPTVPFEMVVEAAQKANAHGFIMELQDGYSTETGEKGAQLSGGQKQRV 647

  Fly   611 AIARALLKNPRILILDEATSALDATSEAEVQKALDTVVQNRTTLVIAHRLSTIRNADLIVVLDQG 675
            |:||||::||.:||||||||||||.||..:|:|:...:|..|.|:|||||||:..|.||||||:|
  Rat   648 AMARALVRNPPVLILDEATSALDAESEYLIQQAIHGNLQRHTVLIIAHRLSTVERAHLIVVLDKG 712

  Fly   676 RVVETGKHDELMGKRGLYFELVRQQ 700
            |||:.|.|.:|:.:.|||.:||::|
  Rat   713 RVVQQGTHQQLLAQGGLYAKLVQRQ 737

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..701 CDD:224055 216/612 (35%)
ABC_membrane 137..415 CDD:279056 76/307 (25%)
ABC_MTABC3_MDL1_MDL2 462..700 CDD:213216 118/237 (50%)
Abcb9NP_071574.1 3a01208 44..734 CDD:273363 231/670 (34%)
ABC_membrane 189..451 CDD:279056 75/295 (25%)
ABCC_TAP 489..714 CDD:213215 111/226 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0058
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54509
OrthoDB 1 1.010 - - D684058at2759
OrthoFinder 1 1.000 - - FOG0000243
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.730

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