DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and abcb11b

DIOPT Version :9

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:XP_003199513.2 Gene:abcb11b / 571189 ZFINID:ZDB-GENE-050517-14 Length:1348 Species:Danio rerio


Alignment Length:706 Identity:226/706 - (32%)
Similarity:362/706 - (51%) Gaps:78/706 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 RKEEEEEDTASEQHFDWKRLWTYLEPHLWELI-GAVCAALIVAYINIRIPNLL--GDLVNTLARY 164
            :|.::||.......|...|..:..|  :|.:: |::||   :|:.:.:...||  |.|.:|...|
Zfish    43 KKSKKEESAIRVGFFQLFRFASCRE--IWMMVFGSLCA---IAHGSAQPLMLLVFGMLTDTFIDY 102

  Fly   165 --ANTYVMDP----INNSF--------------------VKDVSKPASNLLSLYMLQSGFTFMYI 203
              ....:.||    :||:.                    :.|:....:|....|:......|:..
Zfish   103 DIELNELSDPQKACVNNTIQWRNLTQEENLALNMTRSCGLLDIEYEMTNFAYYYVGIGAGVFILG 167

  Fly   204 YLLSRVGEQMAAK----MRQDLFTQIVVQDIAFFDENRTGELVNRLTADVQD-----------FK 253
            ||...:....||:    :|:..|.:::..:|.:||....|||..|::.|:..           |.
Zfish   168 YLQISLWITAAARQIQIIRKMYFRKVMRMEIGWFDCTSVGELNTRMSDDINKINDAIADQVGIFI 232

  Fly   254 TSFKQFVSQGLRSAAQLIGGSISLFMISPHMAAIALASVPCVVMFMTYL-GKKLRSLSKSSQAQA 317
            ..|..||...|...|:  |..::|.:||  ::.:.......:.:|:..| |.:|::.:|      
Zfish   233 QRFTTFVCGFLMGFAR--GWKLTLVIIS--VSPLIGIGAGLMALFVAKLTGMELQAYAK------ 287

  Fly   318 ERATGVCEEALSNIRTVRSSACEYREMQLFEAETNEAARLAQKLGYGIAIFQGLTNFFLNTLVLS 382
              |..|.:|.||::|||.:...|.:|:..::.....|.:...:.|..:..|.|...|.:......
Zfish   288 --AGAVADEVLSSVRTVAAFGGEKKEVDRYDRNLISAQQWGIRKGLIMGFFTGYMWFIIFLCYAL 350

  Fly   383 TLFMGGHL-MSTESLSPGALMAFLVASQGVQRSLAQGSILLGTMIRGMSAGSRVFEFLSLQPQVE 446
            ..:.|..| :.|:..|||.|:...........:|.|.|..|.....|..|.:.:||.:..:|:::
Zfish   351 AFWYGSSLVVDTQEYSPGTLLQVFFGVLIAALNLGQASPCLEAFAAGRGAATIIFETIDREPEID 415

  Fly   447 LL--RGYIIPQERLHGEIRFENVSFAYPMQPDHLVLKDFSLTLRPGQTVALVGASGSGKSTIASL 509
            .|  .||.:  :::.|::.|.|::|.||.:|:..:|...:|.::.|:|.|.||.||:||||...|
Zfish   416 CLSEAGYKL--DKVKGDLEFHNITFHYPSRPEVKILDQLNLQVKSGETTAFVGPSGAGKSTAIQL 478

  Fly   510 VERFYEPSAGNIKLDGYKLSDISPYWLRSNVLGFIEQQPVLFGTSILENIRYGKPDAGEEDVYAA 574
            ::|||:|..|.:.|||:.:..::..|||| ::|.:||:||||.|:|.||||||:|....:|:..|
Zfish   479 IQRFYDPKEGMLTLDGHDIRGLNIQWLRS-LIGIVEQEPVLFATTIAENIRYGRPGVSNDDIITA 542

  Fly   575 ARLSQSHDFVTALPDGYATHVGERGTQLSGGQRQRIAIARALLKNPRILILDEATSALDATSEAE 639
            |:.:.:::|:..||..:.|.|||.|.|:||||:|||||||||::|||||:||.||||||..|||.
Zfish   543 AKEANAYNFIMDLPQKFETLVGEGGGQMSGGQKQRIAIARALVRNPRILLLDMATSALDNESEAV 607

  Fly   640 VQKALDTVVQNRTTLVIAHRLSTIRNADLIVVLDQGRVVETGKHDELMGKRGLYFELVRQQERRD 704
            ||:|||.|...|||:.||||||||:|||:||..:.||.||.||||||:.::|:||.||..|.:.|
Zfish   608 VQEALDKVRMGRTTISIAHRLSTIKNADVIVGFEHGRAVERGKHDELLERKGVYFTLVTLQSQGD 672

  Fly   705 ------IQEQVQAVE----DVVAVKEQQATATETSTAATIATAAETSAATVTVGSS 750
                  .|::::..|    |.......:|.:...|..|:|...:.:..:.....||
Zfish   673 KALNQKAQQEMEEAECCDSDAERRSLNRAGSYRASLRASIHQRSRSQLSNAVPESS 728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..701 CDD:224055 211/629 (34%)
ABC_membrane 137..415 CDD:279056 68/322 (21%)
ABC_MTABC3_MDL1_MDL2 462..700 CDD:213216 126/237 (53%)
abcb11bXP_003199513.2 ABC_membrane 76..382 CDD:279056 68/320 (21%)
PTZ00265 157..1339 CDD:240339 202/587 (34%)
ABC_MTABC3_MDL1_MDL2 432..668 CDD:213216 126/236 (53%)
ABC_membrane 787..1053 CDD:279056
ABC_MTABC3_MDL1_MDL2 1105..1344 CDD:213216
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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