DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1824 and ABCB4

DIOPT Version :9

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:XP_011514610.3 Gene:ABCB4 / 5244 HGNCID:45 Length:1384 Species:Homo sapiens


Alignment Length:769 Identity:232/769 - (30%)
Similarity:356/769 - (46%) Gaps:139/769 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 HLRGTNAPQPPAIPPTNASRLL--------------------------QTTRLLVWGGGSLAIGL 79
            ||:|...|.......|..|.|:                          ::.||..|...||...|
Human     6 HLQGLGWPIRRGFLGTRGSSLISVLSCDRAGSGGSPGWAAAPAGRPGGKSGRLRPWPAPSLGREL 70

  Fly    80 GARSWWAGHRGAI---------------------VHCEGS-RLAIRKEEEEEDTASE-------- 114
            |.|........|:                     ...||. .|.|..:::.:.|.:.        
Human    71 GGRRELLSRAAALALAATAEMDLEAAKNGTAWRPTSAEGDFELGISSKQKRKKTKTVKMIGVLTL 135

  Fly   115 -QHFDWKRLWTYLEPHLWELIGAVCAALIVAYINIRIPNLL---GDLVNTLARYANTYVMDPINN 175
             ::.||       :..|:..:|.:.|   :|: ...:|.::   |::.:.....|..:.. |:|.
Human   136 FRYSDW-------QDKLFMSLGTIMA---IAH-GSGLPLMMIVFGEMTDKFVDTAGNFSF-PVNF 188

  Fly   176 SFVKDVSKPASNLLSLY----MLQSGFTFMYIYLLSRVGE-------------QMAA-----KMR 218
            |            |||.    :|:...| .|.|..|.:|.             .:||     |:|
Human   189 S------------LSLLNPGKILEEEMT-RYAYYYSGLGAGVLVAAYIQVSFWTLAAGRQIRKIR 240

  Fly   219 QDLFTQIVVQDIAFFDENRTGELVNRLTADVQDFKTSFKQFVSQGLRSAAQLIGGSISLFMISPH 283
            |..|..|:.|:|.:||.|.|.||..|||.|:..........|....::.|....|.|..|:....
Human   241 QKFFHAILRQEIGWFDINDTTELNTRLTDDISKISEGIGDKVGMFFQAVATFFAGFIVGFIRGWK 305

  Fly   284 MAAIALASVPCVVMFMTYLGKKLRSLSKSSQAQAERATGVCEEALSNIRTVRSSACEYREMQLFE 348
            :..:.:|..|.:.:......|.|.:.|....|...:|..|.||||..||||.:...:.:|::.::
Human   306 LTLVIMAISPILGLSAAVWAKILSAFSDKELAAYAKAGAVAEEALGAIRTVIAFGGQNKELERYQ 370

  Fly   349 AETNEAARLAQK------LGYGIAIF-----QGLTNFFLNTLVLSTLFMGGHLMST-ESLSPGAL 401
            .....|..:..|      :..|||..     ..|..::.:|||:|..:..|:.|:. .|:..||.
Human   371 KHLENAKEIGIKKAISANISMGIAFLLIYASYALAFWYGSTLVISKEYTIGNAMTVFFSILIGAF 435

  Fly   402 MAFLVASQGVQRSLAQGSILLGTMIRGMSAGSRVFEFLSLQPQVELL--RGYIIPQERLHGEIRF 464
                        |:.|.:..:........|...:|:.:...|:::..  ||:  ..:.:.|.:.|
Human   436 ------------SVGQAAPCIDAFANARGAAYVIFDIIDNNPKIDSFSERGH--KPDSIKGNLEF 486

  Fly   465 ENVSFAYPMQPDHLVLKDFSLTLRPGQTVALVGASGSGKSTIASLVERFYEPSAGNIKLDGYKLS 529
            .:|.|:||.:.:..:||..:|.::.||||||||:||.||||...|::|.|:|..|.|.:||..:.
Human   487 NDVHFSYPSRANVKILKGLNLKVQSGQTVALVGSSGCGKSTTVQLIQRLYDPDEGTINIDGQDIR 551

  Fly   530 DISPYWLRSNVLGFIEQQPVLFGTSILENIRYGKPDAGEEDVYAAARLSQSHDFVTALPDGYATH 594
            :.:..:|| .::|.:.|:||||.|:|.|||.||:.:...:::..|.:.:.:::|:..||..:.|.
Human   552 NFNVNYLR-EIIGVVSQEPVLFSTTIAENICYGRGNVTMDEIKKAVKEANAYEFIMKLPQKFDTL 615

  Fly   595 VGERGTQLSGGQRQRIAIARALLKNPRILILDEATSALDATSEAEVQKALDTVVQNRTTLVIAHR 659
            |||||.||||||:|||||||||::||:||:|||||||||..||||||.|||...:.|||:|||||
Human   616 VGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAEVQAALDKAREGRTTIVIAHR 680

  Fly   660 LSTIRNADLIVVLDQGRVVETGKHDELMGKRGLYFELVRQQERRDIQEQVQAVE 713
            |||:||||:|...:.|.:||.|.|.|||.|.|:||:||..|..   ..|:|:.|
Human   681 LSTVRNADVIAGFEDGVIVEQGSHSELMKKEGVYFKLVNMQTS---GSQIQSEE 731

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..701 CDD:224055 206/620 (33%)
ABC_membrane 137..415 CDD:279056 73/314 (23%)
ABC_MTABC3_MDL1_MDL2 462..700 CDD:213216 122/237 (51%)
ABCB4XP_011514610.3 AAA 108..1369 CDD:333001 216/667 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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