DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and Hmt-1

DIOPT Version :10

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_650503.1 Gene:Hmt-1 / 41925 FlyBaseID:FBgn0038376 Length:866 Species:Drosophila melanogaster


Alignment Length:821 Identity:223/821 - (27%)
Similarity:353/821 - (42%) Gaps:195/821 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 QPPAIPPTNASRLLQTTRLLVWG----GGSLA-IGLGARSWWAGHRGAIVHCEGSRLAIR----- 103
            |.|::|......:|    ||.|.    ..||| |.|....||       .|.:.::..|.     
  Fly   125 QLPSMPTRGHGLVL----LLFWTLAFINESLAFINLRHEDWW-------FHLKTNKDQIEMGLFV 178

  Fly   104 -------------------------KEEEEEDTASEQHFD----------WKRLWTYLEPHLW-- 131
                                     .:..:.|||:|...:          |::|.|.. |:||  
  Fly   179 TRFLCSLLIFVLGLKAPGIMAPYNPHQRLDNDTANESQGNVQTGSAFRNGWRKLRTVF-PYLWPK 242

  Fly   132 -----ELIGAVCAALIVA--YINIRIPNLLGDLVNTLARYANTYVMDPINNSFVKDVSKPASNLL 189
                 ::...||..|::|  .|.:.:|.....||::|......:..|     ||       ...:
  Fly   243 KNIALQIAVIVCIILLLAGRVIKLFLPIYRKKLVDSLTIAPIVFRWD-----FV-------LIYV 295

  Fly   190 SLYMLQSG-------FTFMYIYLLSRVGEQMAAKMRQDLFTQIVVQDIAFFDENRTGELVNRLTA 247
            :|..||.|       |..:..:|..||.:....::..:||..:....:.:..:.:|||::     
  Fly   296 ALSFLQGGGTGSMGLFNNLRTFLWIRVQQYTTREIEIELFRHLHQLSLRWHLQRKTGEVL----- 355

  Fly   248 DVQDFKTSFKQFVSQGLRSAAQLIGGSISLFMISPHMAAIALASVPCVVMFMTYLG--------- 303
                      :.:.:|..|...|:  :..:|.|:|.:..:.:|....|..|..:.|         
  Fly   356 ----------RVMDRGTDSINNLL--NYIVFSIAPTILDLLVAVAYFVYAFNWWFGLIVFLTMFL 408

  Fly   304 -------------KKLRSLSKSSQAQAERATGVCEEALSNIRTVRSSACEYREMQLFEAETNEAA 355
                         |..|.::.:...|..|:.    ::|.|..||:....|:.|:..:    .||.
  Fly   409 YIASTIAITEWRTKYQRRMNLADNEQRARSV----DSLLNFETVKYYGAEHYEVDCY----REAI 465

  Fly   356 RLAQKLGYGIAIFQGLTNFFLNTLVLSTLFMGGHLMSTESLSPGALM-AFLVASQGVQRSLAQGS 419
            ...||            ..||:.|.|:.|....:::....|..|:|: .:||..   .::|..|.
  Fly   466 LKYQK------------EEFLSMLTLNMLNTAQNIILCLGLLAGSLLCVYLVVH---HQTLTVGD 515

  Fly   420 ILL---------------GTMIRGMSAGSRVFEFLSLQPQVELLRGYIIPQERL----------- 458
            .:|               ||..|.:..     .|:.::...:||:    .:|.:           
  Fly   516 FVLFSTYLMELYMPLNWFGTYYRAIQK-----NFVDMENMFDLLK----EEEEIVDAPGCSPLLT 571

  Fly   459 -HGEIRFENVSFAYPMQPDHLVLKDFSLTLRPGQTVALVGASGSGKSTIASLVERFYEPSAGNIK 522
             .|.|.|.||:|.|  .|:.:||::.|.|:..|:|||:||.||:|||||..|:.|||:...|.|.
  Fly   572 AGGGIEFSNVTFGY--SPEKIVLRNVSFTVPAGKTVAIVGPSGAGKSTIMRLLFRFYDVQTGAIL 634

  Fly   523 LDGYKLSDISPYWLRSNVLGFIEQQPVLFGTSILENIRYGKPDAGEEDVYAAARLSQSHDFVTAL 587
            :||..:..:....|| ..:|.:.|..|||..:|..||.|.|..|.:|.||.|||.:..|:.:...
  Fly   635 IDGQNIKLVQQQSLR-KAIGVVPQDTVLFNNTIFYNIEYAKLGASDEAVYEAARAADIHERILGF 698

  Fly   588 PDGYATHVGERGTQLSGGQRQRIAIARALLKNPRILILDEATSALDATSEAEVQKALDTVVQNRT 652
            |:.|.|.|||||.:||||::||:||||.|||.|.|::|||||||||..:|..:|.||..|..|||
  Fly   699 PEKYETKVGERGLRLSGGEKQRVAIARTLLKAPIIVLLDEATSALDTHTERNIQAALARVCANRT 763

  Fly   653 TLVIAHRLSTIRNADLIVVLDQGRVVETGKHDEL-MGKRGLYFELVRQQERRDIQEQVQAVEDVV 716
            |:::|||||||.:||.|:||.||.:.|.|:|:|| :.:.|:|.::.:||.:....||....::..
  Fly   764 TIIVAHRLSTIIHADEILVLQQGSIAERGRHEELVLREDGIYADMWQQQLKNLDAEQSGGSDNGD 828

  Fly   717 AVKEQQATATETSTAATIATAAETSAATVTVGSSSFGGRAN 757
            |       :.|:.:....|..|...:.|.|.|:....|.|:
  Fly   829 A-------SAESGSEKRRAGGAGGPSGTGTGGAHFRAGHAH 862

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..702 CDD:440747 192/649 (30%)
Hmt-1NP_650503.1 MTABC_N 3..241 CDD:465049 25/127 (20%)
ATM1 222..821 CDD:444078 193/663 (29%)

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