DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and Mdr65

DIOPT Version :9

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster


Alignment Length:604 Identity:209/604 - (34%)
Similarity:326/604 - (53%) Gaps:54/604 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 NNSFVKDVSKPASNLL---SLYMLQSGFTFMYIYLLSRVGEQMAAKMRQDLFTQIVVQDIAFFD- 234
            ||..:.|.|.....||   |:.|..||...:.::  :.|..:...:||..||:.::.|||.:.| 
  Fly   109 NNEALYDDSISYGILLTIASVVMFISGIFSVDVF--NMVALRQVTRMRIKLFSSVIRQDIGWHDL 171

  Fly   235 ---ENRTGELVNRLTADVQDFKTSFKQFVSQGLRSAAQLIGGSISLFMIS---PHMAAIALAS-V 292
               :|.|..:|:    ||:..:..    :|:.:.....|:.|.|....||   .....:|::| :
  Fly   172 ASKQNFTQSMVD----DVEKIRDG----ISEKVGHFVYLVVGFIITVAISFSYGWKLTLAVSSYI 228

  Fly   293 PCVVMFMTYLGKKLRSLSKSSQAQAERATGVCEEALSNIRTVRSSACEYREMQLFEAETNEAARL 357
            |.|::...|:.|....|:...|.....|..:.||.||:||||.|...|..|:|.:|.....|.:.
  Fly   229 PLVILLNYYVAKFQGKLTAREQESYAGAGNLAEEILSSIRTVVSFGGEKSEVQRYENFLVPARKA 293

  Fly   358 AQKLGYGIAIFQGLTNFFLNT-LVLS---------TLFMGGHLMSTESLSPGALM-AFLVASQGV 411
            :|..|    .|.||::..|.: |.||         .|.:....:..:..:|..|| ||.....|.
  Fly   294 SQWKG----AFSGLSDAVLKSMLYLSCAGAFWYGVNLIIDDRNVENKEYTPAILMIAFFGIIVGA 354

  Fly   412 QRSLAQGSILLGTMIRGMSAGSRVFEFLSLQPQVELLR--GYIIPQERLHGEIRFENVSFAYPMQ 474
            . ::|:.:..|.:........:.:|:.:.|..:::.|.  |.:: ...|.|::.|::|.|.||.:
  Fly   355 D-NIARTAPFLESFATARGCATNLFKVIDLTSKIDPLSTDGKLL-NYGLRGDVEFQDVFFRYPSR 417

  Fly   475 PDHLVLKDFSLTLRPGQTVALVGASGSGKSTIASLVERFYEPSAGNIKLDGYKLSDISPYWLRSN 539
            |:.:|.:..::.:|.||||||||:||.||||...|::|||:|..|::.||...:...:..|||||
  Fly   418 PEVIVHRGLNIRIRAGQTVALVGSSGCGKSTCVQLLQRFYDPVFGSVLLDDLDIRKYNIQWLRSN 482

  Fly   540 VLGFIEQQPVLFGTSILENIRYGKPDAGEEDVYAAARLSQSHDFVTALPDGYATHVGERGTQLSG 604
            : ..:.|:||||..:|.:||.||||.|.::::.|||..:.:|:|:|.||:.|.:.:||||:||||
  Fly   483 I-AVVGQEPVLFLGTIAQNISYGKPGATQKEIEAAATQAGAHEFITNLPESYRSMIGERGSQLSG 546

  Fly   605 GQRQRIAIARALLKNPRILILDEATSALDATSEAEVQKALDTVVQNRTTLVIAHRLSTIRNADLI 669
            ||:|||||||||::||:||:|||||||||..||.:||:|||...:.|||:|::||||.||.||.|
  Fly   547 GQKQRIAIARALIQNPKILLLDEATSALDYQSEKQVQQALDLASKGRTTIVVSHRLSAIRGADKI 611

  Fly   670 VVLDQGRVVETGKHDELMGKRGLYFELVRQQE--RRDIQEQVQAVEDVVAVKEQQATATETSTAA 732
            |.:..|:|:|.|.||:||...|.|:.:||..:  ..|..|:..::||           |:..:.|
  Fly   612 VFIHDGKVLEEGSHDDLMALEGAYYNMVRAGDINMPDEVEKEDSIED-----------TKQKSLA 665

  Fly   733 TIATAAETSAATVTVGSSS 751
            ....:.|||......|..:
  Fly   666 LFEKSFETSPLNFEKGQKN 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..701 CDD:224055 199/550 (36%)
ABC_membrane 137..415 CDD:279056 69/262 (26%)
ABC_MTABC3_MDL1_MDL2 462..700 CDD:213216 122/237 (51%)
Mdr65NP_476831.1 PTZ00265 91..1300 CDD:240339 209/604 (35%)
ABC_membrane 108..354 CDD:279056 68/258 (26%)
ABC_MTABC3_MDL1_MDL2 405..642 CDD:213216 122/237 (51%)
ABC_membrane 736..1006 CDD:279056
ABC_MTABC3_MDL1_MDL2 1059..1299 CDD:213216
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 140 1.000 Domainoid score I220
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm51436
orthoMCL 1 0.900 - - OOG6_100059
Panther 1 1.100 - - P PTHR24221
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.910

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