DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and Mdr65

DIOPT Version :10

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster


Alignment Length:604 Identity:209/604 - (34%)
Similarity:326/604 - (53%) Gaps:54/604 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 NNSFVKDVSKPASNLL---SLYMLQSGFTFMYIYLLSRVGEQMAAKMRQDLFTQIVVQDIAFFD- 234
            ||..:.|.|.....||   |:.|..||...:.::  :.|..:...:||..||:.::.|||.:.| 
  Fly   109 NNEALYDDSISYGILLTIASVVMFISGIFSVDVF--NMVALRQVTRMRIKLFSSVIRQDIGWHDL 171

  Fly   235 ---ENRTGELVNRLTADVQDFKTSFKQFVSQGLRSAAQLIGGSISLFMIS---PHMAAIALAS-V 292
               :|.|..:|:    ||:..:..    :|:.:.....|:.|.|....||   .....:|::| :
  Fly   172 ASKQNFTQSMVD----DVEKIRDG----ISEKVGHFVYLVVGFIITVAISFSYGWKLTLAVSSYI 228

  Fly   293 PCVVMFMTYLGKKLRSLSKSSQAQAERATGVCEEALSNIRTVRSSACEYREMQLFEAETNEAARL 357
            |.|::...|:.|....|:...|.....|..:.||.||:||||.|...|..|:|.:|.....|.:.
  Fly   229 PLVILLNYYVAKFQGKLTAREQESYAGAGNLAEEILSSIRTVVSFGGEKSEVQRYENFLVPARKA 293

  Fly   358 AQKLGYGIAIFQGLTNFFLNT-LVLS---------TLFMGGHLMSTESLSPGALM-AFLVASQGV 411
            :|..|    .|.||::..|.: |.||         .|.:....:..:..:|..|| ||.....|.
  Fly   294 SQWKG----AFSGLSDAVLKSMLYLSCAGAFWYGVNLIIDDRNVENKEYTPAILMIAFFGIIVGA 354

  Fly   412 QRSLAQGSILLGTMIRGMSAGSRVFEFLSLQPQVELLR--GYIIPQERLHGEIRFENVSFAYPMQ 474
            . ::|:.:..|.:........:.:|:.:.|..:::.|.  |.:: ...|.|::.|::|.|.||.:
  Fly   355 D-NIARTAPFLESFATARGCATNLFKVIDLTSKIDPLSTDGKLL-NYGLRGDVEFQDVFFRYPSR 417

  Fly   475 PDHLVLKDFSLTLRPGQTVALVGASGSGKSTIASLVERFYEPSAGNIKLDGYKLSDISPYWLRSN 539
            |:.:|.:..::.:|.||||||||:||.||||...|::|||:|..|::.||...:...:..|||||
  Fly   418 PEVIVHRGLNIRIRAGQTVALVGSSGCGKSTCVQLLQRFYDPVFGSVLLDDLDIRKYNIQWLRSN 482

  Fly   540 VLGFIEQQPVLFGTSILENIRYGKPDAGEEDVYAAARLSQSHDFVTALPDGYATHVGERGTQLSG 604
            : ..:.|:||||..:|.:||.||||.|.::::.|||..:.:|:|:|.||:.|.:.:||||:||||
  Fly   483 I-AVVGQEPVLFLGTIAQNISYGKPGATQKEIEAAATQAGAHEFITNLPESYRSMIGERGSQLSG 546

  Fly   605 GQRQRIAIARALLKNPRILILDEATSALDATSEAEVQKALDTVVQNRTTLVIAHRLSTIRNADLI 669
            ||:|||||||||::||:||:|||||||||..||.:||:|||...:.|||:|::||||.||.||.|
  Fly   547 GQKQRIAIARALIQNPKILLLDEATSALDYQSEKQVQQALDLASKGRTTIVVSHRLSAIRGADKI 611

  Fly   670 VVLDQGRVVETGKHDELMGKRGLYFELVRQQE--RRDIQEQVQAVEDVVAVKEQQATATETSTAA 732
            |.:..|:|:|.|.||:||...|.|:.:||..:  ..|..|:..::||           |:..:.|
  Fly   612 VFIHDGKVLEEGSHDDLMALEGAYYNMVRAGDINMPDEVEKEDSIED-----------TKQKSLA 665

  Fly   733 TIATAAETSAATVTVGSSS 751
            ....:.|||......|..:
  Fly   666 LFEKSFETSPLNFEKGQKN 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..702 CDD:440747 199/553 (36%)
Mdr65NP_476831.1 MdlB 118..641 CDD:440747 194/539 (36%)
MdlB 711..1299 CDD:440747
Blue background indicates that the domain is not in the aligned region.

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