DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1824 and ABCB7

DIOPT Version :9

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_728642.2 Gene:ABCB7 / 38193 FlyBaseID:FBgn0035244 Length:743 Species:Drosophila melanogaster


Alignment Length:715 Identity:200/715 - (27%)
Similarity:316/715 - (44%) Gaps:128/715 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 QPPAIPPTNASRLLQTTRLLVWGGGSLAIGLGARSWWAGHRGAIVHCEGSRLAIRKEEEEEDTAS 113
            |.|..|....|||   ..:.:.||.....|||                       |.:..|.|:.
  Fly    98 QRPYRPQQQQSRL---CHVHIGGGSDGGSGLG-----------------------KLDAPEVTSK 136

  Fly   114 EQHFDWKR-----LWTYLEPHLWELIGAVCAALIVA--YINIRIPNLLGDLVNTLARYANTYVMD 171
                |..|     :|...:|.:.:.:| :...|:..  .:.:.:|.|....|:|         |.
  Fly   137 ----DMLRAMMAYIWPKEDPLVRKRVG-ISLGLLAGSKLLTVCVPFLFKGAVDT---------MT 187

  Fly   172 PINNSFVKDVSKPASNLLSL-YML----QSGFTFMYIYLLSRVGEQMAAKMRQDLFTQIVVQDIA 231
            .:|.....|....|:..|.| |.:    .:||..:...:.::|......|:..::|..:...|:|
  Fly   188 TLNMDTAPDAVLSAATALMLGYGIARASAAGFNELRNAVFAKVAHHSIRKIASNVFLHLHNLDLA 252

  Fly   232 FFDENRTGELVNRLTADVQDFKTSFKQFVSQGLRSAAQLIGGSISLFMISPHMAAIAL------- 289
            |....:||.|               .:.:.:|.|....::  |..:|.|.|.:..:||       
  Fly   253 FHLNKQTGAL---------------SKTIDRGSRGINFVL--SAMVFNIVPTIFELALVSSILGV 300

  Fly   290 --------ASVPCVVMFMTYL--GKKLRSLSKSSQAQAERATG-VCEEALSNIRTVR-------S 336
                    .|:.||.::..|.  ..:.|:..:....|||...| ...::|.|..||:       .
  Fly   301 KCGLAFAGVSMGCVGIYAAYTLSVTQWRTQFRVFMNQAENEAGNKAVDSLINYETVKYFNNEKYE 365

  Fly   337 SACEYREMQLFEAETNEAARLAQKLGYG-IAIFQGLTNFFL---------NTLVLSTLFMGGHLM 391
            :.|....::.:||.:.:.:.....|.:| .|||....:..:         ..:.:..|.|...|:
  Fly   366 AGCYNEVLKKYEAASLKTSSSLALLNFGQNAIFSSALSLIMVLAAKEIAQGNMTVGDLVMVNALL 430

  Fly   392 STESLSPGALMAFLVASQGVQRSLAQGSILLGTMIRGMSAGSRVFEFLSLQPQVELLRGYIIPQE 456
            ...|:..|.|       ..|.|.:.|..:.:..|...|:..|.:....:.||         :..:
  Fly   431 FQLSIPLGFL-------GSVYREVRQALLDMRAMFTLMNVDSSIQTAANAQP---------LFVD 479

  Fly   457 RLHGEIRFENVSFAYPMQPDHLVLKDFSLTLRPGQTVALVGASGSGKSTIASLVERFYEPSAGNI 521
            ..:..|.|.||||.|  :|...:.:|.|.|:..|:.||:||.||||||::..|:.||:||::|.:
  Fly   480 TTNSSIEFRNVSFEY--EPGKPIFRDLSFTIPAGKNVAIVGGSGSGKSSMVRLLFRFFEPNSGKV 542

  Fly   522 KLDGYKLSDISPYWLRSNVLGFIEQQPVLFGTSILENIRYGKPDAGEEDVYAAARLSQSHDFVTA 586
            .:.|..:|.:....|| .|:..:.|..|||..:|..||.||.......:|..|||::..||.:.:
  Fly   543 LIGGQDISAVDLESLR-KVIAVVPQDSVLFHNTIEHNIHYGNLSKSHAEVQNAARMADLHDSIMS 606

  Fly   587 LPDGYATHVGERGTQLSGGQRQRIAIARALLKNPRILILDEATSALDATSEAEVQKALDTVVQNR 651
            .|..|:|.|||||.:||||::||:|||||:|||..|||.|||||:||:.:|..:.:||......|
  Fly   607 WPGQYSTQVGERGLKLSGGEKQRVAIARAILKNTPILIFDEATSSLDSITEHNILQALTRATSGR 671

  Fly   652 TTLVIAHRLSTIRNADLIVVLDQGRVVETGKHDELMGKRGLYFELVRQQER-----RDIQEQVQA 711
            |::.|||||||:::||.|:||:.|||.|.|.|.||:.:.|||..|...|.:     |:|.|:|.|
  Fly   672 TSICIAHRLSTVKDADEILVLENGRVGERGTHSELLRQNGLYARLWETQTQQFDPSREINEEVAA 736

  Fly   712  711
              Fly   737  736

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..701 CDD:224055 179/628 (29%)
ABC_membrane 137..415 CDD:279056 60/319 (19%)
ABC_MTABC3_MDL1_MDL2 462..700 CDD:213216 109/237 (46%)
ABCB7NP_728642.2 ABC_membrane 164..437 CDD:294371 56/298 (19%)
ATM1 222..717 CDD:227590 160/530 (30%)
P-loop_NTPase 485..720 CDD:304359 109/237 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24221
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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