DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and tap2a

DIOPT Version :9

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_001006594.1 Gene:tap2a / 368771 ZFINID:ZDB-GENE-030616-245 Length:725 Species:Danio rerio


Alignment Length:712 Identity:229/712 - (32%)
Similarity:345/712 - (48%) Gaps:96/712 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 LVWGGGSLAIGLG---ARSWWAGHRGAIVHC------EGSRLAIRKEEEEEDTASEQHFDWKRLW 123
            |::.|.:|:....   .|.|      ..|||      |..|||:              |:..||.
Zfish    52 LLYAGSTLSKDAADPLIRRW------ITVHCFIGSVYETGRLAM--------------FNNYRLD 96

  Fly   124 TYLEPHLWELIGAVCAALIVAYINIRIPNLLGD-------------LVNTLARYANTY------- 168
            .:.   :| |:|.|.|||...:..|.:|:...:             .:..:..|...|       
Zfish    97 KFT---VW-LVGTVAAALACLFWEITLPDTNEESNGKERKQKARVLFIRVIRLYRPDYILLFGAF 157

  Fly   169 -------------------VMDPINNSFVKDVSKPASNLLSLYMLQSGFT-------FMYIYLLS 207
                               |:|.:.:.:..|..:.|...:.|:.|.|.|:       ||...   
Zfish   158 VFLALAVLCEMFIPLYTGEVIDILGSHYQWDNFRSAIIFMGLFSLGSSFSAGCRGGLFMCAI--- 219

  Fly   208 RVGEQMAAKMRQDLFTQIVVQDIAFFDENRTGELVNRLTADVQDFKTSFKQFVSQGLRSAAQLIG 272
               .....:::..||..::.|||.||:..:||::.:||:.|......:....|:..||:..:.:|
Zfish   220 ---NSFTCRVKVQLFGSLIRQDIGFFETIKTGDITSRLSTDTTLMGRAVALNVNVLLRTLVKTLG 281

  Fly   273 GSISLFMISPHMAAIALASVPCVVMFMTYLGKKLRSLSK---SSQAQAERATGVCEEALSNIRTV 334
            ....:..:|..:..:.|...|...:.........:.|||   .|.|||..|.|   ||:|.||||
Zfish   282 MLYLMVSLSWKLTLLMLMETPLTGLLQNIYDTHYQKLSKEVQDSMAQANDAAG---EAVSGIRTV 343

  Fly   335 RSSACEYREMQLFEAETNEAARLAQKLGYGIAIFQGLTNFFLNTLVLSTLFMGGHLMSTESLSPG 399
            :|...|..|...::....|...|..:.....||:..:.......:.::.|:.|...:....:|.|
Zfish   344 KSFKTELGEAHRYDGRLMETHNLKTRRDTVRAIYLLIRRMTELGMKVAMLYYGRLFIQYGQMSTG 408

  Fly   400 ALMAFLVASQGVQRSLAQGSILLGTMIRGMSAGSRVFEFLSLQPQVELLRGYIIPQERLHGEIRF 464
            .|::|::..|.:..::.....:.|.|:..:.|..:|||:...:.:|. :.|.::|:: |.|.::|
Zfish   409 NLVSFILYQQDLGDNIRTLIYIFGDMLNSVGAAGKVFEYQDRKSEVS-IDGNLMPKD-LKGHVKF 471

  Fly   465 ENVSFAYPMQPDHLVLKDFSLTLRPGQTVALVGASGSGKSTIASLVERFYEPSAGNIKLDGYKLS 529
            :.::|:||.:|||.|||||||.|:|||..||||.||.||||..||:||||:|..|.|.|||..|.
Zfish   472 QKLTFSYPRRPDHNVLKDFSLELKPGQITALVGMSGGGKSTCVSLLERFYQPQQGTILLDGKPLQ 536

  Fly   530 DISPYWLRSNVLGFIEQQPVLFGTSILENIRYGKPDAGEEDVYAAARLSQSHDFVTALPDGYATH 594
            |....:|.|.| ..:.|:||||..::.:||.||......|.|..||..:.:|.|::.|..||.|.
Zfish   537 DYQHKYLHSKV-AMVGQEPVLFSGTVRDNIAYGLQGCSMERVKEAASKANAHSFISKLEKGYDTD 600

  Fly   595 VGERGTQLSGGQRQRIAIARALLKNPRILILDEATSALDATSEAEVQKALDTVVQNRTTLVIAHR 659
            |||||..||||::|||||||||::.|::|||||.||:||..||..||:|| :....:|.||||||
Zfish   601 VGERGNLLSGGEKQRIAIARALIREPQVLILDEVTSSLDTESEQMVQQAL-SCCPTQTLLVIAHR 664

  Fly   660 LSTIRNADLIVVLDQGRVVETGKHDELMGKRGLYFELVRQQERRDIQEQVQAVEDVVAVKEQ 721
            |.||..||.|||:|.|.:||.|.|:|||.|:|.|::| |::...|.:...|..|....||.|
Zfish   665 LKTIERADQIVVIDSGELVEKGTHEELMEKKGSYYKL-RERLFSDDKTTKQEKEKSDTVKTQ 725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..701 CDD:224055 210/630 (33%)
ABC_membrane 137..415 CDD:279056 67/326 (21%)
ABC_MTABC3_MDL1_MDL2 462..700 CDD:213216 127/237 (54%)
tap2aNP_001006594.1 MdlB 136..708 CDD:224055 199/585 (34%)
ABC_membrane 157..417 CDD:279056 58/268 (22%)
ABCC_TAP 458..682 CDD:213215 119/226 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0058
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D684058at2759
OrthoFinder 1 1.000 - - FOG0000243
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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