DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and Mdr50

DIOPT Version :10

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_523740.3 Gene:Mdr50 / 36582 FlyBaseID:FBgn0010241 Length:1313 Species:Drosophila melanogaster


Alignment Length:694 Identity:218/694 - (31%)
Similarity:340/694 - (48%) Gaps:110/694 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 EEEEEDTASEQHFDWK-----RLWTYLEP-----HLWELIGAVCAALIVAYINIRIPNLLGDLVN 159
            :..:|:..|:.|.|.|     :|:.|...     ::..|:.||...|.....::...||..|:::
  Fly    54 DASDEEDGSQYHEDVKQVSYFQLFRYATKKDRALYVIGLLSAVATGLTTPANSLIFGNLANDMID 118

  Fly   160 T--LARYANTYVMDPINNSFVKDVSKPAS---NLLSLYMLQSGFTFMYIYLLSRVGEQMAAKMRQ 219
            .  |.....:|..|...::.:.|..:..|   ..:.:.||..  :::.|...:.........:|.
  Fly   119 LGGLLESGKSYRADDAISTLLLDKVRQFSLQNTYIGIIMLVC--SYLSITCFNYAAHSQILTIRS 181

  Fly   220 DLFTQIVVQDIAFFDENRTGELVNRLTADVQDFKTSFKQFVSQGLRSAAQLIGGSISLFMISPHM 284
            ..|..|:.||:.::|.|::||:.:|:..|:...:....:.|...:......:|..:..|:....:
  Fly   182 KFFRSILHQDMKWYDFNQSGEVASRMNEDLSKMEDGLAEKVVMFVHYLVAFVGSLVLAFVKGWQL 246

  Fly   285 AAIALASVPCVVMFMTYLGKKLRSLSKSSQAQAERATGVCEEALSNIRTVRSSACEYREMQLFEA 349
            :.:.|.|:|...:.|..:......|:|........|..|.|.|||.||||::          ||.
  Fly   247 SLVCLTSLPLTFIAMGLVAVATSRLAKKEVTMYAGAAVVAEGALSGIRTVKA----------FEG 301

  Fly   350 ETNEAARLAQK----------------LGYGIAIFQGLTNFFLNTLVLS------TLFMGGHLMS 392
            |..|.|...::                :|:|:..|     |...:..|:      .:..|.|..:
  Fly   302 EAKEVAAYKERVVAAKILNIKRNMFSGIGFGLLWF-----FIYASYALAFWYGVGLVIKGYHEPA 361

  Fly   393 TESLSPGALMAFLVASQGVQRSLAQGSILLGTMIRGMSAG------------SRVFEFLSLQPQV 445
            .|:...|.::....            |:::|:|..||:|.            ::||..:...|::
  Fly   362 YENYDAGTMITVFF------------SVMMGSMNIGMAAPYIEAFGIAKGACAKVFHIIEQIPEI 414

  Fly   446 ELLRGYIIPQERLH---GEIRFENVSFAYPMQPDHLVLKDFSLTLRPGQTVALVGASGSGKSTIA 507
            ..:.|   ..::|:   ..|.|:.|.|.||.:|:..:|...:|.:..||||||||.||.||||..
  Fly   415 NPIDG---EGKKLNEPLTTIEFKEVEFQYPTRPEVSILNKLNLKIHRGQTVALVGPSGCGKSTCI 476

  Fly   508 SLVERFYEPSAGNIKLDGYKLSDISPYWLRSNVLGFIEQQPVLFGTSILENIRYGKPDAGEEDVY 572
            .||:|||:|.|||:..:|..|.|:...||||.: |.:.|:|:||.|||.||||||:.||..|::.
  Fly   477 QLVQRFYDPQAGNLLFNGTNLKDLDINWLRSRI-GVVGQEPILFATSIYENIRYGREDATREEIE 540

  Fly   573 AAARLSQSHDFVTALPDGYATHVGERGTQLSGGQRQRIAIARALLKNPRILILDEATSALDATSE 637
            |||..:.:..|:..||.||.|.|||||.||||||:|||||||||:::|.||:|||||||||..||
  Fly   541 AAAAAANAAIFIKKLPKGYDTLVGERGAQLSGGQKQRIAIARALIRDPEILLLDEATSALDTASE 605

  Fly   638 AEVQKALDTVVQNRTTLVIAHRLSTIRNADLIVVLDQGRVVETGKHDELMGKRGLYFELVRQQ-- 700
            |:||.||:.|...|||:::||||||:|.||.|||:::|.|||:|.|.|||..:..||.||..|  
  Fly   606 AKVQAALEKVSAGRTTIIVAHRLSTVRRADRIVVINKGEVVESGTHQELMELKDHYFNLVTTQLG 670

  Fly   701 --------------ERRDI----QEQVQAV-----EDVVAVKEQ 721
                          :..||    :|:::.:     |||:...|:
  Fly   671 EDDGSVLSPTGDIYKNFDIKDEDEEEIKVLSEDEDEDVMVTDEK 714

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..702 CDD:440747 207/650 (32%)
Mdr50NP_523740.3 PTZ00265 69..1308 CDD:240339 214/679 (32%)

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