DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and Abcc2

DIOPT Version :9

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_036965.1 Gene:Abcc2 / 25303 RGDID:2366 Length:1541 Species:Rattus norvegicus


Alignment Length:551 Identity:151/551 - (27%)
Similarity:259/551 - (47%) Gaps:94/551 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 SNLLSLYMLQSGFTFMYIYLLSRVGEQMAAKMRQDLFTQIVVQDIAFFDENRTGELVNRLTADVQ 250
            |.|.|:|..::....::..||:.:   :.|.||             |||...||.:|||.:.|: 
  Rat  1037 STLWSIYACRNASKALHGQLLTNI---LRAPMR-------------FFDTTPTGRIVNRFSGDI- 1084

  Fly   251 DFKTSFKQFVSQGLRSAAQ-LIGGSISLFMISPHMAAIALASVPCVVMFMT----YLG-----KK 305
               ::....:.|.|||... ..|.:.:|.||.......|:..:|..:::::    |:.     ::
  Rat  1085 ---STVDDLLPQTLRSWMMCFFGIAGTLVMICMATPVFAIIIIPLSILYISVQVFYVATSRQLRR 1146

  Fly   306 LRSLSKSS--QAQAERATGVCEEALSNIRTVRSSACEYREMQLFEAETNEAARLAQKLGYGIAIF 368
            |.|::||.  ...:|..||     |..||.       :...|.|.|...:...:.||     .:|
  Rat  1147 LDSVTKSPIYSHFSETVTG-----LPIIRA-------FEHQQRFLAWNEKQIDINQK-----CVF 1194

  Fly   369 QGLTNFFLNTLVLSTLFMGGHLMSTESLSPGALMAFLVASQGVQRSLAQGSIL------------ 421
            ..:|:   |..:...|.:.|:|:...|       |.|:.   :.|....|.::            
  Rat  1195 SWITS---NRWLAIRLELVGNLVVFCS-------ALLLV---IYRKTLTGDVVGFVLSNALNITQ 1246

  Fly   422 -LGTMIRGMS-------AGSRVFEFLSLQPQVELLRGYIIPQE-RLHGEIRFENVSFAYPMQPDH 477
             |..::|..|       |..|:.|:::::.:...:.....|.: ..||||:|.|....|..:.| 
  Rat  1247 TLNWLVRMTSEAETNIVAVERISEYINVENEAPWVTDKRPPADWPRHGEIQFNNYQVRYRPELD- 1310

  Fly   478 LVLKDFSLTLRPGQTVALVGASGSGKSTIASLVERFYEPSAGNIKLDGYKLSDISPYWLRSNVLG 542
            ||||..:..::.|:.|.:||.:|:|||::.:.:.|..|.:.|.|.:||..::.|..:.||.. |.
  Rat  1311 LVLKGITCNIKSGEKVGVVGRTGAGKSSLTNCLFRILESAGGQIIIDGIDVASIGLHDLRER-LT 1374

  Fly   543 FIEQQPVLFGTSILENI----RYGKPDAGEEDVYAAARLSQSHDFVTALPDGYATHVGERGTQLS 603
            .|.|.|:||..|:..|:    :|     .:|:|:.|..|:....||:.|..|..:.|.|.|..||
  Rat  1375 IIPQDPILFSGSLRMNLDPFNKY-----SDEEVWRALELAHLRSFVSGLQLGLLSEVTEGGDNLS 1434

  Fly   604 GGQRQRIAIARALLKNPRILILDEATSALDATSEAEVQKALDTVVQNRTTLVIAHRLSTIRNADL 668
            .||||.:.:.||:|:..:||:|||||:|:|..:::.:|..:.......|.:.|||||.||.::|.
  Rat  1435 IGQRQLLCLGRAVLRKSKILVLDEATAAVDLETDSLIQTTIRKEFSQCTVITIAHRLHTIMDSDK 1499

  Fly   669 IVVLDQGRVVETGKHDELMGKRGLYFELVRQ 699
            |:|||.|::||.|..:||:..||.::.:.::
  Rat  1500 IMVLDNGKIVEYGSPEELLSNRGSFYLMAKE 1530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..701 CDD:224055 151/551 (27%)
ABC_membrane 137..415 CDD:279056 54/240 (23%)
ABC_MTABC3_MDL1_MDL2 462..700 CDD:213216 86/242 (36%)
Abcc2NP_036965.1 MRP_assoc_pro 7..1533 CDD:188098 151/551 (27%)
ABC_membrane 322..589 CDD:279056
ABCC_MRP_domain1 633..834 CDD:213217
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 862..881
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 901..923
ABC_membrane 979..1245 CDD:279056 55/257 (21%)
ABCC_MRP_domain2 1294..1514 CDD:213211 84/226 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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