DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and Tap2

DIOPT Version :9

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_114445.2 Gene:Tap2 / 24812 RGDID:3818 Length:703 Species:Rattus norvegicus


Alignment Length:648 Identity:205/648 - (31%)
Similarity:347/648 - (53%) Gaps:63/648 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 WG---GGSLAIGLGARSWWAGHRGAIVHCEGSRLAIRKEEEEEDTASEQHFDWKRLWTYLEPHLW 131
            ||   .|.:|..|....|      |::...|::   .||..:|:..:..    .||....:|.| 
  Rat    99 WGWLLAGYVAAALSLAVW------AVLSPAGAQ---EKEPGQENNRALM----IRLLRLSKPDL- 149

  Fly   132 ELIGAVCAALIVAYINIRIPNLLGDLVNTLARYANTYVMDPINNSFVKDVSKPASNLLSLYMLQS 196
                   ..||||:|.:.:. :.|:   ||..:.:..|:|.:...|..|....|...:.|:.:.|
  Rat   150 -------PFLIVAFIFLAMA-VWGE---TLIPHYSGRVIDILGGDFDPDAFASAIFFMCLFSVGS 203

  Fly   197 GFTF-----MYIYLLSRVGEQMAAKMRQDLFTQIVVQDIAFFDENRTGELVNRLTADVQDFKTSF 256
            ..:.     .:::.:||:.    .::|:.||:.::.||:|||.|.:||||.:||::|........
  Rat   204 SLSAGCRGGSFLFTMSRIN----LRIREQLFSSLLRQDLAFFQETKTGELNSRLSSDTSLMSRWL 264

  Fly   257 KQFVSQGLRSAAQLIGGSISLFMISPHMAAIALASVPCVVMFMTYLGKKLRSLSKSSQAQAERAT 321
            ....:..|||..:::|....:..:||.:..::|..:|..:........:.:::.|..|....:|.
  Rat   265 PFNANILLRSLVKVVGLYYFMLQVSPRLTFLSLLDLPLTIAAEKVYNPRHQAVLKEIQDVVAKAG 329

  Fly   322 GVCEEALSNIRTVRSSACEYREMQLFEAETNEAAR-------LAQKLGYGIAIFQGLTNFFLNTL 379
            .|..||:..::||||...|.:|:..:: |..|..|       |.::|   ..:.:.:....:..|
  Rat   330 QVVREAVGGLQTVRSFGAEEQEVSRYK-EALERCRQLWWRRDLEKEL---YLVIRRVMALGMQVL 390

  Fly   380 VLSTLFMGGHLMSTESLSPGALMAFLVASQGVQRSLAQGSILLGTMIRGMSAGSRVFEFLSLQPQ 444
            :|:   .|...:....::.|.|::||:..:.|...:.....:.|.|:..:.|..:||.:|..:|.
  Rat   391 ILN---CGVQQILAGEVTRGGLLSFLLYQEEVGHHVRNLVYMYGDMLSNVGAAEKVFSYLDRRPN 452

  Fly   445 VELLRGYIIPQERLHGEIRFENVSFAYPMQPDHLVLKDFSLTLRPGQTVALVGASGSGKSTIASL 509
            :. ..|.:.| .|:.|.:.|::|||:||.:|:..||:..:.||.||:..||||.:||||||:|:|
  Rat   453 LP-KPGTLAP-PRVEGRVEFQDVSFSYPSRPEKPVLQGLTFTLHPGKVTALVGPNGSGKSTVAAL 515

  Fly   510 VERFYEPSAGNIKLDGYKLSDISPYWLRSNVLGFIEQQPVLFGTSILENIRYGKPDAGEEDVYAA 574
            ::..|:|:.|.:.|||..|.....::|...|: .:.|:||||..|:.:||.||..:..:..|.||
  Rat   516 LQNLYQPTGGKVLLDGEPLVQYDHHYLHRQVV-LVGQEPVLFSGSVKDNIAYGLRNCEDAQVMAA 579

  Fly   575 ARLSQSHDFVTALPDGYATHVGERGTQLSGGQRQRIAIARALLKNPRILILDEATSALDATSEAE 639
            |:.:.:.||:..:.:|..|.:||||:||:.||:||:||||||::|||:|||||||||||    ||
  Rat   580 AQAACADDFIGEMTNGINTEIGERGSQLAVGQKQRLAIARALVRNPRVLILDEATSALD----AE 640

  Fly   640 VQKALDT--VVQNRTTLVIAHRLSTIRNADLIVVLDQGRVVETGKHDELMGKRGLYFELVRQQ 700
            .::||.|  ..::||.|||||||.|::|||.::||.||::||   ||:|..::.:|..||:|:
  Rat   641 CEQALQTWRSQEDRTMLVIAHRLHTVQNADQVLVLKQGQLVE---HDQLRDEQDVYAHLVQQR 700

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..701 CDD:224055 194/596 (33%)
ABC_membrane 137..415 CDD:279056 66/289 (23%)
ABC_MTABC3_MDL1_MDL2 462..700 CDD:213216 112/239 (47%)
Tap2NP_114445.2 3a01208 1..697 CDD:273363 202/643 (31%)
ABC_membrane 156..416 CDD:279056 61/274 (22%)
P-loop_NTPase 457..680 CDD:304359 108/228 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0058
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D684058at2759
OrthoFinder 1 1.000 - - FOG0000243
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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