DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and haf-8

DIOPT Version :9

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_502776.1 Gene:haf-8 / 190369 WormBaseID:WBGene00001818 Length:633 Species:Caenorhabditis elegans


Alignment Length:635 Identity:214/635 - (33%)
Similarity:329/635 - (51%) Gaps:64/635 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 GHRGAIVHCEGSRLAIRKEEEEEDTASEQHFDWKRLWTYLEPHLWELIGAVCAA----LIVAY-- 145
            |..|.||.        :.::|||:...            |..||||:: .:|..    .:.||  
 Worm    20 GAAGEIVD--------KNDDEEENRLP------------LSEHLWEIV-KLCGKQWRWFVPAYTL 63

  Fly   146 ------INIRIPNLLGDLVNTLARYANTYVMDPINNSFVKDVSKPASNLLSLYMLQSGFTFMYIY 204
                  :|:..|.|.|.::      .|...|    .||  |:.|.|..||:|............|
 Worm    64 LILDCALNLIEPALYGQMM------TNAIQM----KSF--DIIKRACLLLALIQFSEATCKSACY 116

  Fly   205 LLSRVGEQMAAK-MRQDLFTQIVVQDIAFFDENRTGELVNRLTADVQDFKTSFKQFVSQGLRSAA 268
            ...:..|::.|: :|..||..|:.|:|:|||||:||:||:|:|.|.:....:....:...:.:..
 Worm   117 FFMQYAEKLTARNIRIQLFRSILHQEISFFDENKTGQLVSRITHDSESISNTLPVHIETLVNNLF 181

  Fly   269 QLIGGSISLFMISPHMAAIALASVPCVVMFMTYLGKKLRSLSKSSQAQAERATGVCEEALSNIRT 333
            ...|....:|..|..:...:....|..::...|.|..:..||:........:....||.||.|||
 Worm   182 MFFGSIPIMFCYSWQLTLTSFIEFPITLLMTRYYGLAVEKLSEKENDATAASNETVEEVLSAIRT 246

  Fly   334 VRSSACEYREMQLFEAETNEAARLAQK---LGYGIAIFQGLTNFFLNTLVLS----TLFMGGHLM 391
            |||.|.|..|.:.:...|.:..:::.|   ||       .:.|:|...::.|    ....||:|.
 Worm   247 VRSFAAENFEQKRYTKNTEDWFKISTKTVTLG-------TIYNYFWALMLRSQDVIRYLYGGYLA 304

  Fly   392 STESLSPGALMAFLVASQGVQRSLAQGSILLGTMIRGMSAGSRVFEFLSLQPQVELLRGYIIPQE 456
            ....::|.||:.|:.....:..::...|.|...:::.:....:|...::.:||::...|...|: 
 Worm   305 LNGRMAPEALLTFIFYHWRLHTAINAFSSLFSGVMKTIGLSRKVIHLINRKPQLDYDFGTETPE- 368

  Fly   457 RLHGEIRFENVSFAYPMQPDHLVLKDFSLTLRPGQTVALVGASGSGKSTIASLVERFYEPSAGNI 521
             :.|:|.||.|.||||.:....|:...:|::..|:||||||.||:||||:.||:::||.|.:|.|
 Worm   369 -IQGKIEFEVVEFAYPTRKTVNVINGINLSIESGKTVALVGPSGNGKSTLVSLIQQFYTPQSGRI 432

  Fly   522 KLDGYKLSDISPYWLRSNVLGFIEQQPVLFGTSILENIRYGKPDAGEEDVYAAARLSQSHDFVTA 586
            ..||..:.:|:.....||: ..:.|:|.||..:|.|||.:|..:..||.:..||.::..|:||:.
 Worm   433 LTDGIPIQNINHQHYHSNI-ALVAQEPTLFSGTIRENILFGIENGTEEAMLKAAEMANVHEFVSK 496

  Fly   587 LPDGYATHVGERGTQLSGGQRQRIAIARALLKNPRILILDEATSALDATSEAEVQKALDTVVQNR 651
            :.|||.|..||:|.|:||||:|||||||||::|||:|||||||||||:.||..||:||:...:.|
 Worm   497 MDDGYDTKCGEKGVQMSGGQKQRIAIARALIRNPRVLILDEATSALDSESEGMVQEALNKCAKER 561

  Fly   652 TTLVIAHRLSTIRNADLIVVLDQGRVVETGKHDELM-GKRGLYFELVRQQ 700
            |.:||||||||:|.|..|.|::.|.|.|.|.||||| .:.|||::||.:|
 Worm   562 TVIVIAHRLSTVRKAQKIAVIENGSVKEMGCHDELMENQDGLYYKLVSKQ 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..701 CDD:224055 207/603 (34%)
ABC_membrane 137..415 CDD:279056 73/297 (25%)
ABC_MTABC3_MDL1_MDL2 462..700 CDD:213216 120/238 (50%)
haf-8NP_502776.1 MdlB 42..613 CDD:224055 206/593 (35%)
ABC_membrane 63..318 CDD:279056 69/273 (25%)
ABC_MTABC3_MDL1_MDL2 373..611 CDD:213216 120/238 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0058
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54509
OrthoDB 1 1.010 - - D684058at2759
OrthoFinder 1 1.000 - - FOG0000243
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.830

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