DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and Abcb1a

DIOPT Version :10

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_035206.2 Gene:Abcb1a / 18671 MGIID:97570 Length:1276 Species:Mus musculus


Alignment Length:629 Identity:206/629 - (32%)
Similarity:316/629 - (50%) Gaps:57/629 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 RKEEEEEDTASE-----QHFDWKRLWTYLEPHLWELIGAVCAALIVAYINIRIPNLL---GDLVN 159
            :||::|:..|..     ::..|.       ..|:.|:|.:.|.:    ..:.:|.::   ||:.:
Mouse    23 KKEKKEKKPAVSVLTMFRYAGWL-------DRLYMLVGTLAAII----HGVALPLMMLIFGDMTD 76

  Fly   160 TLARYANTYVMDPINNSFVKDVSKPASNL-------LSLYMLQSGFTFMYIYLLSRVGEQMAA-- 215
            :.|...|              |||.::|:       :...:.:...|:.|.|.....|..:.|  
Mouse    77 SFASVGN--------------VSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIVAYI 127

  Fly   216 --------------KMRQDLFTQIVVQDIAFFDENRTGELVNRLTADVQDFKTSFKQFVSQGLRS 266
                          |:||..|..|:.|:|.:||.:..|||..|||.||..........:....::
Mouse   128 QVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQA 192

  Fly   267 AAQLIGGSISLFMISPHMAAIALASVPCVVMFMTYLGKKLRSLSKSSQAQAERATGVCEEALSNI 331
            .|...||.|..|.....:..:.||..|.:.:......|.|.|.:........:|..|.||.|:.|
Mouse   193 MATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAI 257

  Fly   332 RTVRSSACEYREMQLFEAETNEAARLAQKLGYGIAIFQGLTNFFLNTLVLSTLFMGGHLMSTESL 396
            |||.:...:.:|::.:.....||.||..|......|..|.....:........:.|..|:.::..
Mouse   258 RTVIAFGGQKKELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEY 322

  Fly   397 SPGALMAFLVASQGVQRSLAQGSILLGTMIRGMSAGSRVFEFLSLQPQVELLRGYIIPQERLHGE 461
            |.|.::....:......|:.|.|..:........|...||:.:..:|.::.........:.:.|.
Mouse   323 SIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKIIDNKPSIDSFSKSGHKPDNIQGN 387

  Fly   462 IRFENVSFAYPMQPDHLVLKDFSLTLRPGQTVALVGASGSGKSTIASLVERFYEPSAGNIKLDGY 526
            :.|:|:.|:||.:.:..:||..:|.::.||||||||.||.||||...|::|.|:|..|.:.:||.
Mouse   388 LEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQRLYDPLDGMVSIDGQ 452

  Fly   527 KLSDISPYWLRSNVLGFIEQQPVLFGTSILENIRYGKPDAGEEDVYAAARLSQSHDFVTALPDGY 591
            .:..|:..:|| .::|.:.|:||||.|:|.||||||:.|...:::..|.:.:.::||:..||..:
Mouse   453 DIRTINVRYLR-EIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFIMKLPHQF 516

  Fly   592 ATHVGERGTQLSGGQRQRIAIARALLKNPRILILDEATSALDATSEAEVQKALDTVVQNRTTLVI 656
            .|.|||||.||||||:|||||||||::||:||:|||||||||..|||.||.|||...:.|||:||
Mouse   517 DTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVI 581

  Fly   657 AHRLSTIRNADLIVVLDQGRVVETGKHDELMGKRGLYFELVRQQ 700
            ||||||:||||:|...|.|.:||.|.|||||.::|:||:||..|
Mouse   582 AHRLSTVRNADVIAGFDGGVIVEQGNHDELMREKGIYFKLVMTQ 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..702 CDD:440747 202/608 (33%)
Abcb1aNP_035206.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 1/2 (50%)
PTZ00265 47..1263 CDD:240339 201/598 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 646..681
Blue background indicates that the domain is not in the aligned region.

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