DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and Abcb4

DIOPT Version :10

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_032856.2 Gene:Abcb4 / 18670 MGIID:97569 Length:1276 Species:Mus musculus


Alignment Length:636 Identity:214/636 - (33%)
Similarity:319/636 - (50%) Gaps:86/636 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 NLLGDLVNTLARYAN------------------------TYVMDPINNSFVKDV---SKPASNLL 189
            ||:|.|  ||.||::                        ..|...:.:.||.:.   |.|.:  .
Mouse    35 NLIGLL--TLFRYSDWQDKLFMFLGTLMAIAHGSGLPLMMIVFGEMTDKFVDNTGNFSLPVN--F 95

  Fly   190 SLYMLQSGFTF-----MYIYLLSRVGE-------------QMAA-----KMRQDLFTQIVVQDIA 231
            ||.||..|...     .|.|..|.:|.             .:||     |:||..|..|:.|::.
Mouse    96 SLSMLNPGRILEEEMTRYAYYYSGLGGGVLVAAYIQVSFWTLAAGRQIKKIRQKFFHAILRQEMG 160

  Fly   232 FFDENRTGELVNRLTADVQDFKTSFKQFVSQGLRSAAQLIGGSISLFMISPHMAAIALASVPCVV 296
            :||...|.||..|||.||..........|....::.|....|.|..|:....:..:.:|..|.:.
Mouse   161 WFDIKGTTELNTRLTDDVSKISEGIGDKVGMFFQAIATFFAGFIVGFIRGWKLTLVIMAISPILG 225

  Fly   297 MFMTYLGKKLRSLSKSSQAQAERATGVCEEALSNIRTVRSSACEYREMQLFEAETNEAARLAQK- 360
            :......|.|.:.|....|...:|..|.||||..||||.:...:.:|::.::.....|.::..| 
Mouse   226 LSTAVWAKILSTFSDKELAAYAKAGAVAEEALGAIRTVIAFGGQNKELERYQKHLENAKKIGIKK 290

  Fly   361 -----LGYGIAIF-----QGLTNFFLNTLVLSTLFMGGHLMST-ESLSPGALMAFLVASQGVQRS 414
                 :..|||..     ..|..::.:|||:|..:..|:.|:. .|:..||.            |
Mouse   291 AISANISMGIAFLLIYASYALAFWYGSTLVISKEYTIGNAMTVFFSILIGAF------------S 343

  Fly   415 LAQGSILLGTMIRGMSAGSRVFEFLSLQPQVELL--RGYIIPQERLHGEIRFENVSFAYPMQPDH 477
            :.|.:..:........|...:|:.:...|:::..  ||:  ..:.:.|.:.|.:|.|:||.:.:.
Mouse   344 VGQAAPCIDAFANARGAAYVIFDIIDNNPKIDSFSERGH--KPDNIKGNLEFSDVHFSYPSRANI 406

  Fly   478 LVLKDFSLTLRPGQTVALVGASGSGKSTIASLVERFYEPSAGNIKLDGYKLSDISPYWLRSNVLG 542
            .:||..:|.::.||||||||.||.||||...|::|.|:|:.|.|.:||..:.:.:...|| .::|
Mouse   407 KILKGLNLKVKSGQTVALVGNSGCGKSTTVQLLQRLYDPTEGKISIDGQDIRNFNVRCLR-EIIG 470

  Fly   543 FIEQQPVLFGTSILENIRYGKPDAGEEDVYAAARLSQSHDFVTALPDGYATHVGERGTQLSGGQR 607
            .:.|:||||.|:|.||||||:.:...:::..|.:.:.::||:..||..:.|.||:||.||||||:
Mouse   471 VVSQEPVLFSTTIAENIRYGRGNVTMDEIEKAVKEANAYDFIMKLPQKFDTLVGDRGAQLSGGQK 535

  Fly   608 QRIAIARALLKNPRILILDEATSALDATSEAEVQKALDTVVQNRTTLVIAHRLSTIRNADLIVVL 672
            |||||||||::||:||:|||||||||..||||||.|||...:.|||:|||||||||||||:|...
Mouse   536 QRIAIARALVRNPKILLLDEATSALDTESEAEVQAALDKAREGRTTIVIAHRLSTIRNADVIAGF 600

  Fly   673 DQGRVVETGKHDELMGKRGLYFELVRQQERRDIQEQVQAVEDVVAVKEQQA 723
            :.|.:||.|.|.|||.|.|:||.||..|   ....|:.:.|..|.:.:::|
Mouse   601 EDGVIVEQGSHSELMKKEGIYFRLVNMQ---TAGSQILSEEFEVELSDEKA 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..702 CDD:440747 210/613 (34%)
Abcb4NP_032856.2 PTZ00265 30..1269 CDD:240339 214/636 (34%)
MdlB 39..632 CDD:440747 207/614 (34%)
Interaction with HAX1. /evidence=ECO:0000250 622..646 7/26 (27%)

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