DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and Abcb1b

DIOPT Version :9

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_035205.1 Gene:Abcb1b / 18669 MGIID:97568 Length:1276 Species:Mus musculus


Alignment Length:640 Identity:209/640 - (32%)
Similarity:323/640 - (50%) Gaps:75/640 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 RKEEEEEDTASEQHFD--------WKRL------WTYLEPHLWELIGAVCAALIVAYINIRIPNL 153
            ||:::|...:.::..|        |:.|      |.||      |:|.:||              
Mouse   672 RKQDQERRLSMKEAVDEDVPLVSFWRILNLNLSEWPYL------LVGVLCA-------------- 716

  Fly   154 LGDLVNTLARYANTYVMDPINNSFVKD----VSKPASNLLSLYMLQ-----------SGFTFMYI 203
               ::|...:.....|...|...|.:|    ..:...||.||:.|.           .||||   
Mouse   717 ---VINGCIQPVFAIVFSRIVGVFSRDDDHETKRQNCNLFSLFFLVMGLISFVTYFFQGFTF--- 775

  Fly   204 YLLSRVGEQMAAKMRQDLFTQIVVQDIAFFDE--NRTGELVNRLTADVQDFKTSFKQFVSQGLRS 266
               .:.||.:..::|..:|..::.|||::||:  |.||.|..||.:|....|.:....::...::
Mouse   776 ---GKAGEILTKRVRYMVFKSMLRQDISWFDDHKNSTGSLTTRLASDASSVKGAMGARLAVVTQN 837

  Fly   267 AAQLIGGSISLFMISPHMAAIALASVPCVVMFMTYLGKKLRSLSKSSQAQAERATGVCEEALSNI 331
            .|.|..|.|...:....:..:.:..:|.:|:......|.|...:...:.|.|.:..:..||:.|.
Mouse   838 VANLGTGVILSLVYGWQLTLLLVVIIPLIVLGGIIEMKLLSGQALKDKKQLEISGKIATEAIENF 902

  Fly   332 RTVRSSACEYREMQLFEAETNEAARLAQKLGYGIAIFQGLTNFFLNTLVLSTLFMGGHLMSTESL 396
            ||:.|...|.:...::........|.|.|..:...|....|...:.....:....|.:|::.:  
Mouse   903 RTIVSLTREQKFETMYAQSLQVPYRNAMKKAHVFGITFSFTQAMMYFSYAACFRFGAYLVAQQ-- 965

  Fly   397 SPGALMAF----LVASQGVQRSLAQG--SILLGTMIRGMSAGSRVFEFLSLQPQVELLRGYIIPQ 455
                ||.|    ||.|..|..::|.|  |.......:...:.|.:...:...|:::......:..
Mouse   966 ----LMTFENVMLVFSAVVFGAMAAGNTSSFAPDYAKAKVSASHIIRIIEKTPEIDSYSTEGLKP 1026

  Fly   456 ERLHGEIRFENVSFAYPMQPDHLVLKDFSLTLRPGQTVALVGASGSGKSTIASLVERFYEPSAGN 520
            ..|.|.::|..|.|.||.:|:..||:..||.::.|||:||||:||.||||:..|:||||:|.||:
Mouse  1027 TLLEGNVKFNGVQFNYPTRPNIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGS 1091

  Fly   521 IKLDGYKLSDISPYWLRSNVLGFIEQQPVLFGTSILENIRYGKPD--AGEEDVYAAARLSQSHDF 583
            :.|||.::..::..|||:: ||.:.|:|:||..||.|||.||...  ...|::..||:.:..|.|
Mouse  1092 VFLDGKEIKQLNVQWLRAH-LGIVSQEPILFDCSIAENIAYGDNSRAVSHEEIVRAAKEANIHQF 1155

  Fly   584 VTALPDGYATHVGERGTQLSGGQRQRIAIARALLKNPRILILDEATSALDATSEAEVQKALDTVV 648
            :.:|||.|.|.||::||||||||:|||||||||::.|.||:|||||||||..||..||:|||...
Mouse  1156 IDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAR 1220

  Fly   649 QNRTTLVIAHRLSTIRNADLIVVLDQGRVVETGKHDELMGKRGLYFELVRQQERR 703
            :.||.:|||||||||:|||||||::.|:|.|.|.|.:|:.::|:||.:|:...:|
Mouse  1221 EGRTCIVIAHRLSTIQNADLIVVIENGKVKEHGTHQQLLAQKGIYFSMVQAGAKR 1275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..701 CDD:224055 204/612 (33%)
ABC_membrane 137..415 CDD:279056 64/298 (21%)
ABC_MTABC3_MDL1_MDL2 462..700 CDD:213216 126/239 (53%)
Abcb1bNP_035205.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26
PTZ00265 55..1270 CDD:240339 207/633 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 633..659
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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