DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and mrp-3

DIOPT Version :9

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_001359552.1 Gene:mrp-3 / 181677 WormBaseID:WBGene00003409 Length:1505 Species:Caenorhabditis elegans


Alignment Length:759 Identity:177/759 - (23%)
Similarity:306/759 - (40%) Gaps:139/759 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RLLVSNC---------------GR----------SSDIFSRHLLQPTQQPLPRLQNAARLMRQHL 42
            |:||:||               ||          .:|:.:|..||.......:.|.::.      
 Worm   808 RILVTNCTSFLQESGKIIVMKDGRIKHCGTYNELLTDVEAREYLQEVDNEYAQAQESSG------ 866

  Fly    43 RGTNAPQPPAIPP---TNASRLLQTTRLLVWGGGSLAIGLGARSWWAGHRGAIVHCEGSRLAIRK 104
            ..:...:...|.|   .:.||:.:.:||             ::......:.:||..:.....|.|
 Worm   867 EESGGEENSDILPGSIASGSRMSRLSRL-------------SKISRKKSKSSIVEKKKPDALITK 918

  Fly   105 EEEEEDTASE----QHFDWKRLWTYLEPHLWELIGAVCAAL-----IVAY----INIRIPNLL-- 154
            ||......:.    .:|....:.||:.|:...::..|..||     :.|:    |:|..|:.:  
 Worm   919 EEAAIGRVNPGVYLLYFKAMGIVTYVLPYAIAVVLNVSFALGRSLWLTAWSDANIDINHPDTMSV 983

  Fly   155 GDLVNTLARYANTYVMDPINNSFVKDVSKPASNLLSLYMLQSGFTFMYIYLLSRVGEQMAAKMRQ 219
            |..:...|.:..|.|:                           |.|..:.||...|...:..:.:
 Worm   984 GARLGVYAGFGITEVI---------------------------FLFFSLVLLLIGGVAASKNLHK 1021

  Fly   220 DLFTQIVVQDIAFFDENRTGELVNRLTADVQ--DFK--TSFKQFVSQGLRSAAQLIGGSISLFMI 280
            .|...::...:::||....|.::|||..|::  |.:  :||: |:...|.:..|.:   :.:...
 Worm  1022 PLLHNVLRNPLSYFDITPIGRIINRLAKDMEVVDLRLSSSFR-FLVMALINMVQTV---LIVSYT 1082

  Fly   281 SPHMAAIALASVPCVVMF---MTYLGKKLRSLSKSSQAQAERATGVCEEALSNIRTVRSSACEYR 342
            :|...||.   :|..:::   :.|..|..|.|.:.:............|.|..|.|||:    ::
 Worm  1083 TPLFIAII---IPVFIIYFFVLKYSIKSTRQLQRIASLTRSPIFSNFSETLQGISTVRA----FQ 1140

  Fly   343 EMQLFEAETNEAARLAQKLGYGIAIFQGLTNFFLNTLVLSTLFMGGHLMSTESLSPGALMAFLVA 407
            ....|....:|......|..|    :..:.|.:|:..:        .|:....:...|::|.:..
 Worm  1141 WSDEFVRRNDEHLNTHVKCSY----YSQMANRWLSIRL--------ELLGNIVIFSAAILAIIGK 1193

  Fly   408 SQGVQRSLAQGSI--------LLGTMIRGMS-------AGSRVFEFLSLQPQVE-LLRGYIIPQE 456
            ..|:...:...|:        :|...:|.::       :..|:.|:...:.:.| .|....:|..
 Worm  1194 ESGITAGMLGLSVSYSLNITFMLNMFVRQINEVETNVVSVERIDEYSKTKSEAEWRLDNNNLPSN 1258

  Fly   457 -RLHGEIRFENVSFAYPMQPDHLVLKDFSLTLRPGQTVALVGASGSGKSTIASLVERFYEPSAGN 520
             ...|.:..|:.|..|..:.| ||||..||.:.|||.|.:.|.:|:|||::|..:.|..|.:.||
 Worm  1259 WPTGGAVNIEDYSCRYRDELD-LVLKQISLNILPGQKVGVCGRTGAGKSSLALALFRIVEAADGN 1322

  Fly   521 IKLDGYKLSDISPYWLRSNVLGFIEQQPVLFGTSILENIRYGKPDAGEEDVYAAARLSQSHDFVT 585
            |.:|....|.|..:.||.. |..|.|:.|||..::..||. .|....::.::.|...|.....|.
 Worm  1323 ISIDQTITSHIGLHDLREK-LTIIPQENVLFANTLRFNID-PKGQFTDQQLWLALENSNLKAHVE 1385

  Fly   586 ALPDGYATHVGERGTQLSGGQRQRIAIARALLKNPRILILDEATSALDATSEAEVQKALDTVVQN 650
            .||....:.|.|.|...|.||||.:.:.||||:..::|:|||||:.:|..::..||..:.....:
 Worm  1386 LLPHKLESPVAEGGENFSVGQRQLLCLTRALLRKSKVLVLDEATAGIDNRTDTMVQATIREKFAD 1450

  Fly   651 RTTLVIAHRLSTIRNADLIVVLDQGRVVETGKHDELMGKRGLYF 694
            .|.:.|||||.||.:.|.|:|:|.||:||.|...||:..|...|
 Worm  1451 STIITIAHRLHTIIDYDRIIVMDAGRIVEDGIPGELLKNRNSQF 1494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..701 CDD:224055 152/611 (25%)
ABC_membrane 137..415 CDD:279056 54/295 (18%)
ABC_MTABC3_MDL1_MDL2 462..700 CDD:213216 86/233 (37%)
mrp-3NP_001359552.1 MRP_assoc_pro 25..1501 CDD:188098 177/759 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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