DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and pgp-5

DIOPT Version :10

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_001257116.1 Gene:pgp-5 / 181276 WormBaseID:WBGene00003999 Length:1252 Species:Caenorhabditis elegans


Alignment Length:594 Identity:196/594 - (32%)
Similarity:306/594 - (51%) Gaps:55/594 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 LGDLVNTLARYANTY---VMDPINNSFVKDVSKPASNLLSLYMLQSGFT-----FMYIYLLSRVG 210
            ||:....|.:..|..   .:||::.:....:.:...|.:.|.....||.     |:...::..||
 Worm    58 LGETSQVLVKVTNAINNKTIDPVDLAHAYKLFESDMNRVVLLFFLVGFAYFTFGFLQFSIMKFVG 122

  Fly   211 EQMAAKMRQDLFTQIVVQDIAFFDENRTGELVNRLTADVQDFKTSFKQFVSQGLRSAAQLIGGSI 275
            :..|..:|:...::::.:||::||...||.|...|..:::.|:..|.:.::..:......:.|:|
 Worm   123 DNTAYNVRRQYISRLLRKDISYFDGMSTGHLSIVLNDNMERFREVFNEKIALIIALLTDFVIGTI 187

  Fly   276 SLFMISPHMAAIALASVPCVVMFMTYLGKKLRSLS--KSSQAQAE---RATGVCEEALSNIRTVR 335
            ..|.....:|...     .|..|...|...|.|..  |:::.|.|   .|..:..:||...:||.
 Worm   188 LAFYTDWRLACYG-----TVFSFGIVLSGLLDSWGKMKNNEKQNEHISNAGSIAFQALGCYKTVS 247

  Fly   336 SSACEYREMQLFEAETNEAARLAQKLGYGIAIFQGLTNFFLNTLVLSTLFMGGHLMSTESLSPGA 400
            |...:.:|::.:..|.....:.|....:..::.:....||.|.|....|:.|.:::...::.||.
 Worm   248 SLNGQQQEVERYTEELKNGEKYALNRAFVFSLSRSADYFFTNALNFVILYFGANMIYEGTIEPGV 312

  Fly   401 LMAFLVASQGVQRSLAQGSILLGTMIRGMS------------------AGSRVFEFLSLQPQVEL 447
            ::..|.       .:..||..||..|..:|                  :.:...||.|.:     
 Worm   313 VVRILY-------YILFGSYCLGEAILHISRLASAIPLTVPIADILLDSDATADEFFSEE----- 365

  Fly   448 LRGYIIPQERLHGEIRFENVSFAYPMQPDHLVLKDFSLTLRPGQTVALVGASGSGKSTIASLVER 512
                  .::...|.|.|:||.|:||.:||..|||:.|..::.|:.:||||||||||||:..|:..
 Worm   366 ------IKDTFQGIISFKNVLFSYPTRPDVPVLKEISFNVQGGECIALVGASGSGKSTVIQLLLH 424

  Fly   513 FYEPSAGNIKLDGYKLSDISPYWLRSNVLGFIEQQPVLFGTSILENIRYGKPDAGEEDVYAAARL 577
            :|...:|.|.:||..:.:|:...|| ..:|.:.|:||||.|||.||||:|||||.|:::..|.:.
 Worm   425 YYNIDSGRISIDGNDIYNINIKQLR-QAMGVVFQEPVLFNTSIEENIRFGKPDATEQEIIDALKN 488

  Fly   578 SQSHDFVTALPDGYATHVGERGTQLSGGQRQRIAIARALLKNPRILILDEATSALDATSEAEVQK 642
            :.:.|||...|||..|.|||||.||||||:|||||||.|::|||||:|||||||||..||..||:
 Worm   489 ANAFDFVCNFPDGIKTIVGERGAQLSGGQKQRIAIARTLVRNPRILLLDEATSALDNESEFIVQE 553

  Fly   643 ALDTVVQNRTTLVIAHRLSTIRNADLIVVLDQGRVVETGKHDELMGKRGLYFELVRQQERRDIQE 707
            ||......|||:|:||||||||||:.|:|:::|.:||.|.|.:|:...|:|..||:.|......|
 Worm   554 ALQKASIGRTTIVVAHRLSTIRNANKIIVMEKGEIVEVGDHKQLIAMNGVYNNLVQTQLMSTNYE 618

  Fly   708 QVQAVEDVV 716
            ::...|:.|
 Worm   619 KMNENEERV 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..702 CDD:440747 193/578 (33%)
pgp-5NP_001257116.1 MdlB 34..614 CDD:440747 193/579 (33%)
MdlB 678..1243 CDD:440747
Blue background indicates that the domain is not in the aligned region.

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