DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and mrp-1

DIOPT Version :9

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_001024719.2 Gene:mrp-1 / 180409 WormBaseID:WBGene00003407 Length:1534 Species:Caenorhabditis elegans


Alignment Length:545 Identity:139/545 - (25%)
Similarity:242/545 - (44%) Gaps:103/545 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 LLSRVGEQMAAK-MRQDLFTQIVVQDIAFFDENRTGELVNRLTADVQDFKTSFKQFVSQGLRSAA 268
            ::..:|...|:: :...|...|:...:||||....|.::||...||....|...:.:|..:|:|.
 Worm  1037 IIMALGMVCASRLLHATLLENIMRSPMAFFDVTPLGRILNRFGKDVDGVDTDIPRTMSMFIRTAV 1101

  Fly   269 QLIGGSISLFMISPHMAAIALASVPCVV-----MFMTYLG------------KKLRSLSKS---- 312
            ..|           .:.||.|.:.|..:     :|:.|..            |:|.|.|:|    
 Worm  1102 SSI-----------EIIAIILWATPLAISLLLPLFIVYFVVLRFYVSTSRQLKRLESASRSPIYS 1155

  Fly   313 ------SQAQAERATGVCEEAL--------SNIRTVRSSACEYREMQLFEAETNEAARLAQKLGY 363
                  ..|.:.||.||.::.:        .|:.|...|....|.:         |.|| :.:| 
 Worm  1156 HFQESIQGASSIRAYGVVDKFIRESQHRVDENLATYYPSIVANRWL---------AVRL-EMVG- 1209

  Fly   364 GIAIFQGLTNFFLNTLVLSTLFMGGHLMSTESLSPGALMAFLVASQGVQRSLAQGSILLGTMIRG 428
                         |.:|||:.....:...:..||.|.:...:..:..:.::|.....:...:...
 Worm  1210 -------------NLIVLSSAGAAVYFRDSPGLSAGLVGLSVSYALNITQTLNWAVRMTSELETN 1261

  Fly   429 MSAGSRVFEFL----------SLQPQVELLRGYIIPQERLHGEIRFENVSFAYPMQPDHLVLKDF 483
            :.|..|:.|:.          ||.|:       ..|:   :|||..:|.|..|....| |||...
 Worm  1262 IVAVERINEYTITPTEGNNSQSLAPK-------SWPE---NGEISIKNFSVRYRPGLD-LVLHGV 1315

  Fly   484 SLTLRPGQTVALVGASGSGKSTIASLVERFYEPSAGNIKLDGYKLSDISPYWLRSNVLGFIEQQP 548
            :..:.|.:.:.:||.:|:|||::...:.|..|...|.|::||..::|:....|||. |..:.|.|
 Worm  1316 TAHISPCEKIGIVGRTGAGKSSLTLALFRIIEADGGCIEIDGTNIADLLLEQLRSR-LTIVPQDP 1379

  Fly   549 VLFGTSILENIRYGKPDA----GEEDVYAAARLSQSHDFVTALPDGYATHVGERGTQLSGGQRQR 609
            |||..::..|:     |.    .::.::.|.|.:....||.:|.:|...|:.|.|..||.||||.
 Worm  1380 VLFSGTMRMNL-----DPFFAFSDDQIWEALRNAHLDSFVKSLQEGLHHHISEGGENLSVGQRQL 1439

  Fly   610 IAIARALLKNPRILILDEATSALDATSEAEVQKALDTVVQNRTTLVIAHRLSTIRNADLIVVLDQ 674
            |.:|||||:..::|:||||.:|:|..:::.:||.:....::.|.|.|||||:|:.::|.::|||:
 Worm  1440 ICLARALLRKTKVLVLDEAAAAVDVETDSLLQKTIREQFKDCTVLTIAHRLNTVMDSDRLLVLDK 1504

  Fly   675 GRVVETGKHDELMGK-RGLYFELVR 698
            |.|.|.....:|:.. .|:::.:.:
 Worm  1505 GCVAEFDTPKKLLSNPDGIFYSMAK 1529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..701 CDD:224055 139/545 (26%)
ABC_membrane 137..415 CDD:279056 49/245 (20%)
ABC_MTABC3_MDL1_MDL2 462..700 CDD:213216 80/242 (33%)
mrp-1NP_001024719.2 MRP_assoc_pro 23..1531 CDD:188098 139/545 (26%)
ABC_membrane 309..570 CDD:294371
ABCC_MRP_domain1 614..815 CDD:213217
ABC_membrane 976..1248 CDD:279056 49/245 (20%)
ABCC_MRP_domain2 1293..1513 CDD:213211 80/226 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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